Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3315 ATGGTAGGACCAGTGAGGCCTCAAATTGTGCTATTTGGTTCTTCCATAGTTCAATTGAGTTACAATAATGAAGGTTGGGGAGCTATTCTTGCCAACTTGTATGCTCGCAAGGCAGATATAATAATGAGAGGATACTCTGGTTGGAATTCAAGGCGTGCTCTGCAGGTTCTCGACAAAATATTCCCCAAGGATGCTGTTGTGCAACCATCATTGGTAATTGTGTATTTCGGCGGCAATGATTCTATTCATCCACATCCATCTGGACTTGGTCCTCATGTGCCCCTAGAAGAATACACTGAAAATATGAGGAAGATTGCTACCCATCTTAAGAGCCTTTCAAAGAAGACTCGTGTAATATTTCTCACTTCTCCTCCCATCAATGAGGCACAGATCAGCGAAACGCTCAGTAATGTGCTGGGGAAAATAAGAAGAACAAATGAATCCTGTAGAATATATTCAGAAGCGTGTTTAGAGCTGTGCCGCGAGATGAATGTCAAGGCCATTGATCTCTGGTCTGCACTTCAGCAAAGGGATGATTGGTTAGATGTTTGCTTCACGGATGGAATTCACCTTTCATCTGAAGGGAGCAAGATTGTGGTGAAAGAGATATTGAAGGTTCTCAAAGAAGCAGACTGGGAACCTAGTCTGCACTGGAAATCAATGCCAACTGAGTTTGAAGAAGATTCACCATATGATCCAATTGCTGTGGATGGAAAGACTACTGTAAATGTTTCTAACTGGAGCTTCCAGGGAAATTTTCAAACGGACTAG 771 0.4254 MVGPVRPQIVLFGSSIVQLSYNNEGWGAILANLYARKADIIMRGYSGWNSRRALQVLDKIFPKDAVVQPSLVIVYFGGNDSIHPHPSGLGPHVPLEEYTENMRKIATHLKSLSKKTRVIFLTSPPINEAQISETLSNVLGKIRRTNESCRIYSEACLELCREMNVKAIDLWSALQQRDDWLDVCFTDGIHLSSEGSKIVVKEILKVLKEADWEPSLHWKSMPTEFEEDSPYDPIAVDGKTTVNVSNWSFQGNFQTD* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3315 256 Coils Coil 95 115 - -
Lja3g3315 256 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 250 - -
Lja3g3315 256 Pfam GDSL-like Lipase/Acylhydrolase family 11 197 IPR013830 -
Lja3g3315 256 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 250 IPR045136 -
Lja3g3315 256 SUPERFAMILY SGNH hydrolase 7 210 - -
Lja3g3315 256 Gene3D SGNH hydrolase 6 236 IPR036514 -
Lja3g3315 256 CDD Isoamyl_acetate_hydrolase_like 8 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3315 Lja-Chr3 65303422 65306630 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3315 K23978 - gmx:100796512 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3315 3 65303422 65306630 Lja3g3315 3 65303422 65306630 ECH
Lja1g3389 1 42217081 42220123 Lja3g3315 3 65303422 65306630 PCT