Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3389 ATGGCAGGGCTTATGAGACCTCGGATTGTGCTGTTTGGTTCCTCGATAATTCAGATGAGTTTTGATAATGGAGGTTGGGGTGCTATTCTTGCCAATCTCTATGCTAGAAAGGCAGACATTGTCTTGCGAGGGTACTCAGGCTGGAACACAAGGCATGCTTTGGAGGTTTTGGATGACATTTTCCCCAAGGATGCTCCTGAGCAACCAGCACTGGTAGTTGTCTATTTTGGTGGAAATGATTCTATTCGCCCTCACCCATCTGGCCTTGGTCCTCATGTTCCCCTTGAAGAGTACATTGAAAACATGAGGAAGATTGCTAACCATCTCAAGAGCCTCTCGGATCACATTCGGCTCATATTTCTCACTTCTCCTCCCATCAATGAAGAACAAGTCCGCAGAAGACTAAGTGCAACACAGACGGGAAGAACAAATGAATCATGCGGAACATATGCAAAGGCATTAGTGGAGCTGTGTGAGGAGTTGAATTTGAAGGTCATTAATCTCTGGTCTGCAATCCAACAAAGGGATGGCTGGTTAGATGTTAGCTTCACGGATGGAGTTCATCTTTCAGCAGAGGGAAGCAAGGTAGTGGTGAAAGAAATATTAAAGGTCTTAAGAGAAGCAGATTGGAAGCCAAGTCTTCATTGGATGTCACTACCAACTGAATTTGCAGAAGATTCACCTTATTATCCTCCTTCAGCAGATGGAACAACCACTATCAATGTGTCTTACAGTATCCCAAGGAGGAATTTGCAATGGGACATATAG 768 0.444 MAGLMRPRIVLFGSSIIQMSFDNGGWGAILANLYARKADIVLRGYSGWNTRHALEVLDDIFPKDAPEQPALVVVYFGGNDSIRPHPSGLGPHVPLEEYIENMRKIANHLKSLSDHIRLIFLTSPPINEEQVRRRLSATQTGRTNESCGTYAKALVELCEELNLKVINLWSAIQQRDGWLDVSFTDGVHLSAEGSKVVVKEILKVLREADWKPSLHWMSLPTEFAEDSPYYPPSADGTTTINVSYSIPRRNLQWDI* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3389 255 Coils Coil 95 115 - -
Lja1g3389 255 CDD Isoamyl_acetate_hydrolase_like 8 205 - -
Lja1g3389 255 Pfam GDSL-like Lipase/Acylhydrolase family 11 195 IPR013830 -
Lja1g3389 255 PANTHER ISOAMYL ACETATE-HYDROLYZING ESTERASE 1 1 252 IPR045136 -
Lja1g3389 255 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 252 - -
Lja1g3389 255 Gene3D SGNH hydrolase 5 229 IPR036514 -
Lja1g3389 255 SUPERFAMILY SGNH hydrolase 7 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3389 Lja-Chr1 42217081 42220123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3389 K23978 - gmx:100792188 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3389 1 42217081 42220123 Lja1g3389 1 42217081 42220123 ECH
Lja1g3389 1 42217081 42220123 Lja3g3315 3 65303422 65306630 PCT