Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3301 ATGTTGTCCCAGAAACAATCAGAAGAAGCAATAGTCTCCGCCGCCACCGAGACTGAGCATGGTGGTGGTGGCACCAGGGAGGAAGACAGTGGTCAAGACCAGTCCTTGGTCAGCCTCAAGAGCTTCCTCTGGCATGGTGGTTCTGTATGGGATGCATGGTTCAGCTGTGCTTCAAATCAAGTTGCTCAAGTGCTGTTGACACTGCCATATTCATTCTCACAACTGGGCATGTTATCAGGCATCTTGTTTCAGGTGTTTTATGGCCTTGTTGGAAGCTGGACTGCTTACTTAATCAGTGTCCTCTACATGGAGTACCGCACTAGAAAGGAAAAGGAAAATGTTAGCTTCAAGAACCATGTCATCCAGTGGTTCGAGGTGCTTGATGGGTTACTAGGTACATATTGGAAAGCATTGGGGCTGGCTTTCAACTGTACTTTCCTTCTATTTGGATCAGTGATTCAGCTTATAGCATGTGCAAGTAACATCTATTACATAAATGACAAATTGGACAAAAGGACTTGGACTTATATCTTTGGAGCATGCTGTGCCACCACTGTGTTCATACCTTCTTTTCACAATTACCGAATCTGGTCATTTCTGGGTCTTGGAATGACAACTTACACGGCTTGGTACATGGCTATAGCAGCTATTGCTCATGGCCAGATAGAAAACGTCAAACACACGGGTCCATCAAAGCTAGTGCTATACTTCACCGGAGCCACTAACATTTTGTACACGTTTGGTGGACACGCTGTTACTGTAGAAATTATGCATGCCATGTGGAAACCTCAAAAGTTCAAGTACATTTACTTGATAGCCACTTTGTACGTTTACACACTAACGATTCCTTCCGCCGTTTCCGTTTACTGGGCTTTCGGTGATGAGTTGCTTAACCACTCCAACGCCTTCTCTCTCCTCCCTAAGTCTGGCTTCCGTGACGCCGCCGTTATCCTCATGCTCATTCACCAGTTCATCACATTTGGGTTTGCTTGTACTCCATTGTATTTTGTGTGGGAGAAGGTTATTGGGATGCATGACACCAAAAGTATATGTTTGAGGGCACTGGCAAGATTGCCAGTTGTGATACCTATATGGTTCCTGGCTATTATCTTCCCTTTCTTTGGGCCCATAAACTCTGCTGTTGGGGCTCTACTGGTTAGTTTCACTGTCTACATCATCCCAGCCATTGCTCATATGCTCACCTACAGAACAGCCTCTGCCAGAAAGAATGCTGCAGAGAAGCCTCCTTTCTTCCTGCCAAGCTGGACTGCTATGTTTGTCTTCAATGCATTCATTGTGGTTTGGGTTTTAGTGATTGGGTTTGGGTTTGGAGGATGGGCTAGCATGACCAACTTTATAAGGCAAATTGACACATTTGGGCTTTTTGCCAAGTGCTACCAGTGCAAACCCCCAACGCCGCCACTTGCCACCGCTGCACCTGCCTCTCATGCCCACCATCAGAGCCGAGCCTTCTCACTCAACTCTACACAATATTAG 1497 0.4616 MLSQKQSEEAIVSAATETEHGGGGTREEDSGQDQSLVSLKSFLWHGGSVWDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQVFYGLVGSWTAYLISVLYMEYRTRKEKENVSFKNHVIQWFEVLDGLLGTYWKALGLAFNCTFLLFGSVIQLIACASNIYYINDKLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLGMTTYTAWYMAIAAIAHGQIENVKHTGPSKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKYIYLIATLYVYTLTIPSAVSVYWAFGDELLNHSNAFSLLPKSGFRDAAVILMLIHQFITFGFACTPLYFVWEKVIGMHDTKSICLRALARLPVVIPIWFLAIIFPFFGPINSAVGALLVSFTVYIIPAIAHMLTYRTASARKNAAEKPPFFLPSWTAMFVFNAFIVVWVLVIGFGFGGWASMTNFIRQIDTFGLFAKCYQCKPPTPPLATAAPASHAHHQSRAFSLNSTQY* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3301 498 MobiDBLite consensus disorder prediction 1 33 - -
Lja3g3301 498 Pfam Transmembrane amino acid transporter protein 45 438 IPR013057 -
Lja3g3301 498 PANTHER AUXIN INFLUX TRANSPORTER 2 472 - -
Lja3g3301 498 PANTHER OS05G0424000 PROTEIN-RELATED 2 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3301 Lja-Chr3 64773005 64779547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3301 15 468 Organic Solute Cotransporters AT2G21050 79.560 0.0 762
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3301 K13946 - gmx:100778463 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3301 3 64773005 64779547 Lja3g3301 3 64773005 64779547 ECH
Lja1g3416 1 42580778 42586972 Lja3g3301 3 64773005 64779547 PCT