Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3295 ATGGATTCTTGGGTTAGAGTGCTACTTCTCGCAGCTTTTTGCATTCTTCCAGTTTTGGTCGAGTGCAGAGTGAGGCACTGCAATTTTCATGTGGTGGCAAAGAATACCACTAGATTATGTTCAAGCAAATCCATTGTCACCGTTAATGGCCAGTTCCCGGGACCCACTCTCTACGCCAGGGAAGGTGACACAGTGCTGGTCAAAGTCCTCAATAAAGTCAACCACAATATTACCATCCACTGGCATGGCATCAGGCAATTGCGTACCGGTTGGGCTGATGGACCTGCATATGTGACACAGTGTCCAATTCAACCAGGACATAGCTATGTGTACAACTTCACCATTACTGGGCAAAGAGGAACACTTCTTTGGCATGCACATGTTAACTGGCTTAGGTCAACTGTTCATGGTGCTATAGTTATCTTGCCAAAGAGAGGTGTACCTTATCCTTTCCCCAAGCCAGATAATGAATTGGTTTTGGTACTAGGAGAATGGTGGAAATCTGATACTGAAGCTATTATCAATGAAGCTCTCAAATCAGGATTGGCACCAAATGTCTCAGATGCTCACACCATTAATGGCCTTCCAGGGAGAGTGGCCAATTGTTCAACACAGGGTGCTCACAATCTGCCAGTGGAGAGTGGCAAGACCTACTTGCTGAGAATCATCAATGCTGCACTCAATGAGGAACTCTTCTTCAAAATTGCAGGCCACAAGCTCACAGTGGTAGAAGTAGATGCCACATATGTGAAGCCTTTCAAGATTGAAACAATTGTGATAGCACCTGGCCAAACCACCAATGTCCTTCTAACTGCTGACCAAAAATCTGGGAAATATTTGGTAGCAGCTTCTCCTTACATGGATGCACCAATTGCTGTGGACAATTTAACTGCTACAGCCACATTGCACTACACTGGCACTCTCAGCACCTCACCTACAGTTCTCACCCTACCACCTCCTCAAAATGCTACCCAAATTGCCAACAAATTTGTCAACTCTCTTAAAGGCCTTAATTCCAAGAAATACCCTGTCAAAGTCCCAATTAAAGTTGATCATTCACTTTTCTTCACTGTGGGGTTGGGGATTATTCCATGCCCATCTTGCAAAGCTGCAAATGGGAGCAGAGTTGTTGCTTCTGTTAACAATGTGACATTTACTATGCCAAGCACTGCTTTACTTCAGGCACATTATTTCAAAATCAATGGGGTGTTCACCACTGATTTCCCAGCCAAACCACCCCATGTGTTTAACTACACAGGTGCTGGACCTGCAAATTTGAACACAACAAGTGGTACAAGGCTTTATAGGCTACCGTTCAACGCGACTGTTCAGCTTGTTCTGCAAGATACCGGGATCGTCGCGCCAGAGAACCACCCGGTTCATCTTCACGGATTCAATTTCTTTGTTGTTGGTAGAGGGGTAGGAAATTTCAATAGCACAACTGATCCAAAGAAGTTTAACCTTGTTGATCCTGTTGAGAGAAACACTGTTGGAGTACCAGCTGGAGGGTGGACTGCAATTAGATTCAGAGCAGATAATCCAGGAGTTTGGTTCATGCACTGCCATTTGGAGGTGCATACAACATGGGGGCTAAAGATGGCATTTTTGGTGGACAATGGCAAAGGTTCTAAGCAATCATTGATACCCCCTCCAAAAGATCTTCCAAAATGCTGA 1674 0.448 MDSWVRVLLLAAFCILPVLVECRVRHCNFHVVAKNTTRLCSSKSIVTVNGQFPGPTLYAREGDTVLVKVLNKVNHNITIHWHGIRQLRTGWADGPAYVTQCPIQPGHSYVYNFTITGQRGTLLWHAHVNWLRSTVHGAIVILPKRGVPYPFPKPDNELVLVLGEWWKSDTEAIINEALKSGLAPNVSDAHTINGLPGRVANCSTQGAHNLPVESGKTYLLRIINAALNEELFFKIAGHKLTVVEVDATYVKPFKIETIVIAPGQTTNVLLTADQKSGKYLVAASPYMDAPIAVDNLTATATLHYTGTLSTSPTVLTLPPPQNATQIANKFVNSLKGLNSKKYPVKVPIKVDHSLFFTVGLGIIPCPSCKAANGSRVVASVNNVTFTMPSTALLQAHYFKINGVFTTDFPAKPPHVFNYTGAGPANLNTTSGTRLYRLPFNATVQLVLQDTGIVAPENHPVHLHGFNFFVVGRGVGNFNSTTDPKKFNLVDPVERNTVGVPAGGWTAIRFRADNPGVWFMHCHLEVHTTWGLKMAFLVDNGKGSKQSLIPPPKDLPKC* 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3295 557 SUPERFAMILY Cupredoxins 346 557 IPR008972 -
Lja3g3295 557 CDD CuRO_3_LCC_plant 403 540 IPR034289 GO:0005507
Lja3g3295 557 CDD CuRO_2_LCC_plant 159 304 IPR034285 -
Lja3g3295 557 Gene3D - 18 143 IPR008972 -
Lja3g3295 557 ProSitePatterns Multicopper oxidases signature 2. 520 531 IPR002355 GO:0005507
Lja3g3295 557 Pfam Multicopper oxidase 33 144 IPR011707 GO:0005507
Lja3g3295 557 Gene3D - 363 557 IPR008972 -
Lja3g3295 557 Pfam Multicopper oxidase 158 306 IPR001117 -
Lja3g3295 557 PANTHER MULTI-COPPER OXIDASE 4 557 IPR045087 -
Lja3g3295 557 TIGRFAM laccase: laccase 22 557 IPR017761 GO:0046274|GO:0048046|GO:0052716
Lja3g3295 557 PANTHER LACCASE 4 557 - -
Lja3g3295 557 CDD CuRO_1_LCC_plant 28 143 IPR034288 GO:0005507
Lja3g3295 557 ProSitePatterns Multicopper oxidases signature 1. 515 535 IPR033138 -
Lja3g3295 557 SUPERFAMILY Cupredoxins 17 168 IPR008972 -
Lja3g3295 557 Pfam Multicopper oxidase 408 540 IPR011706 GO:0005507|GO:0016491
Lja3g3295 557 Gene3D - 154 339 IPR008972 -
Lja3g3295 557 SUPERFAMILY Cupredoxins 151 319 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3295 Lja-Chr3 64446681 64451291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3295 K05909 - gmx:100797234 993.416
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g2227 1 25887562 25894026 Lja3g3295 3 64446681 64451291 PCT