Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3232 ATGGCAAAGGATAGGACCATTGGTGTGGCTTTGGACTTCTCCAAGAGCAGCAAAAACGCTCTGAAATGGGCACTTGAGAACTTGGCTGATAAAGGTGACAACATTTACATCATTCACATCAACCCCAACTCTCTAGATGAATCTCGTAACAAGCTTTGGGGCAAATCTGGTTCTCCCCTGATTCCTTTGAAAGAGTTCAGAGAGCCTGAGGTTATGACCAAGTATGATGTTCAAATTGATATTGAGGTTCTTGATTTGCTTGACACTGCTTCCAGGCAGAAAGAGGTGAACATTGTTACAAAAATATACTGGGGTGATGCAAGAGAGCAACTTCTGGATGCTGTTGAAGATCTGAAGCTTGATTCTCTGGTTATGGGAAGCAGGGGTCTCAGCACAATTCAAAGGATAATATTGGGAAGTGTGAGCAATTTTGTGATGACCCATGCCCCTTGCCCTGTGACTATAGTCAAGGATTCAAGCAGCAGCAACAAGTGA 495 0.4364 MAKDRTIGVALDFSKSSKNALKWALENLADKGDNIYIIHINPNSLDESRNKLWGKSGSPLIPLKEFREPEVMTKYDVQIDIEVLDLLDTASRQKEVNIVTKIYWGDAREQLLDAVEDLKLDSLVMGSRGLSTIQRIILGSVSNFVMTHAPCPVTIVKDSSSSNK* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3232 164 PANTHER IMP2'P 4 163 - -
Lja3g3232 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Lja3g3232 164 Pfam Universal stress protein family 5 157 IPR006016 -
Lja3g3232 164 PANTHER OS05G0453700 PROTEIN 4 163 - -
Lja3g3232 164 CDD USP_Like 6 156 - -
Lja3g3232 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Lja3g3232 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Lja3g3232 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Lja3g3232 164 Gene3D HUPs 2 164 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3232 Lja-Chr3 62985724 62987776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3232 3 156 Receptor kinase-like Gene Family AT5G35380 27.044 2.72e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3232 - - gmx:100499951 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3232 3 62985724 62987776 Lja3g3232 3 62985724 62987776 ECH
Lja1g2208 1 25584998 25587610 Lja3g3232 3 62985724 62987776 PCT