Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3129 ATGGCGGCCACATTGTCCGACGACCTCCGTACGCCGATGCTCCCGGCGGCCGAGAAGAAGGCGGAGGTGGAGAAGATCTGCATCGACGAGATGCTGCAGAAGTATTGCGGGGAGTTTGGGCGGTGGCAGCTGAAGCACTTTGTCCTCACCAGTCTTGCTTGGGCGCTTGAGGCGTTTCACACCATGGTGATGATTTTTGCCGATAGAGAACCGGATTGGAGGTGCGTCGCCGGCTCCGGTTGCAGCGCCGCCGTGGGAAGTGTTTGTGGTCTCCGTCCGGGGGAGTGGGAGTGGGTCGGCGGGAACGGTGCGTCGACGGTGTCAGAGTGGGGATTGATTTGCGGTGAGAAATATAAGGTGGGGCTGGTCCAGGCCATCTTTTTCGCCGGCTGTATGATCGGTGCTGGCGTATTTGGTCACCTCTCAGACTCCTCTCTTGGAAGGAAAGGCTCTCTCACAGTGGTTTGCGCCCTCAATGCAGTCTTCGGCTGCTTAACAGCAATGTCCCCTAACTACATCACCTACGTCTTCCTCCGCCTCCTCACCGGCTTCACTACCGGTGGTGTCGGCCTCTGCGCCTTTGTCCTTGCCACCGAACCCGTCGGCCCCACCAAGCGAGGCGCTGCGGGAATGTCCACCTTCTACTTCTTCTCCACCGGCATCGCGCTCCTATCCGGCATCGCCTATGTCTTCCAAACATGGCGAACCCTCTACATCGTCACCTCCATCCCCTCGTTCCTCTACATCCTCCTCGTCCTTCCCTTCATCTCTGAGTCCCCAAGATGGTACCTTGTTCGTGGAAGAATAACCGAGGCCACAAAGATCATGTCCTCGATCGCTTCATCCAACGGAAAGCACCTACCAGAAGGGGTGCTTCTCGGACTGGATGAAGACGTATCAGCATCAGGATCAGCATCAACATTACCATTACTAACACACAATGGCTCATGCAACAAGGATGCAGTTGCTGGGTCCATAGTGGACGTGCTTCGCTCTCCCATAACACGCATTAGATTGTTCCTAGCCGTGACTCTAAACTTCTTAGCCTCTGTAGTGTACTATGGTCTCAGTTTAAACGTGACGAACCTCGAAACCAACCTCTACATGAGCGTATTGCTGAACGCGGTGGCCGAGATGCCTGCGTTCACGATAACCGCGGTGTTGCTGGACAAGTTCGGGAGGAGGCCGCTGGCGATAGGGACAATGTGGTTCAGCGGGTTCTTTTGCTTTTTGGGGTGTCTGACTGGAAATGTTGGAGTGTGGAAGGTGGTGAGGATGGTGTGCGGTGTATTGGGGATTTTTGGGATGGCGGGGACTTATAACTTGTTGTTTATTTACACGTCGGAGCTGTTTCCCACGGTGGTGAGAAATGCCGCGCTTGGTTGCGCCACGCAGGCCTCGCAGATGGGGGCTATACTGGCGCCGGTTGTGGTGGTTATGGGTGGTGCTTGGCCATTTGTGGTGTTTGCTGCCTGCGGGATGTTTGGTGGGGTGTTTGCGTTTTATCTGCCGGAGACGCTGAACCTGCCACTCTATGATACTTTTAATGGATTAGAAGCTGGACTTGCATAA 1572 0.5515 MAATLSDDLRTPMLPAAEKKAEVEKICIDEMLQKYCGEFGRWQLKHFVLTSLAWALEAFHTMVMIFADREPDWRCVAGSGCSAAVGSVCGLRPGEWEWVGGNGASTVSEWGLICGEKYKVGLVQAIFFAGCMIGAGVFGHLSDSSLGRKGSLTVVCALNAVFGCLTAMSPNYITYVFLRLLTGFTTGGVGLCAFVLATEPVGPTKRGAAGMSTFYFFSTGIALLSGIAYVFQTWRTLYIVTSIPSFLYILLVLPFISESPRWYLVRGRITEATKIMSSIASSNGKHLPEGVLLGLDEDVSASGSASTLPLLTHNGSCNKDAVAGSIVDVLRSPITRIRLFLAVTLNFLASVVYYGLSLNVTNLETNLYMSVLLNAVAEMPAFTITAVLLDKFGRRPLAIGTMWFSGFFCFLGCLTGNVGVWKVVRMVCGVLGIFGMAGTYNLLFIYTSELFPTVVRNAALGCATQASQMGAILAPVVVVMGGAWPFVVFAACGMFGGVFAFYLPETLNLPLYDTFNGLEAGLA* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3129 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 28 521 - -
Lja3g3129 523 ProSitePatterns Sugar transport proteins signature 2. 181 206 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja3g3129 523 Pfam Sugar (and other) transporter 117 512 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja3g3129 523 ProSitePatterns Sugar transport proteins signature 1. 385 401 IPR005829 GO:0016021|GO:0022857|GO:0055085
Lja3g3129 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 46 508 IPR020846 GO:0022857
Lja3g3129 523 SUPERFAMILY MFS general substrate transporter 119 510 IPR036259 -
Lja3g3129 523 Gene3D MFS general substrate transporter like domains 47 515 IPR036259 -
Lja3g3129 523 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 28 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3129 Lja-Chr3 59843909 59848522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3129 7 519 Organic Solute Cotransporters AT3G20660 69.246 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3129 K08202 - gmx:100797665 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3129 3 59843909 59848522 Lja3g2486 3 31557528 31559529 PCT