Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2486 ATGGAGCCTGCAGCTTCAGTTCAAACAACAGCACCTTCCCAATCTCCCTCCTCAGCAGCAGAGCATGAGAGAAAACTGATGCAGTCATGGGATGACATGGTTGAAAAAAGCTTAGGAAACTTCGGCTGGATGGAGTTCCTGCAAGCAGTGCTTGTTGCTGTTGCAATGTTCTTCGATGCACAACAATCTTTCATCAGTATCTACACAGATAACTACCCAACATGGCACTGTAACACAAACTCAAACTCAAACACCACCACATGTTCCTCTACCTCTGACATCTGCAAAATCCCAAGATCTTCTTGGTCATGGGACTCACACCCTTCCATGACCATTATTTCCCACTGGGGGCTTGAATGTGCAAGCACCTTCATCACTGGTTTACCCCAATCTGCTTTTTTCATAGGTTGCCTTCTAGGCTCCTCTGTTCTCGCAGCTTTAGCTGATTCCGCTCTAGGCAGAAAAAACATGCTTGTTTTCTCTTGTGTGTCTATGTCAATCACTTCAATCCTCATTATTTTCTCCCCCAACATCTGGGTCTACTCTGCTTTGAAATTCCTAATCGGTTTCTGGCGTTCCTCCATTGGAACCTGTGTTCTAGTCCTTCTCACAGAAAATGTGAGTGCAGAGTGGAGGTTCAGGGTGGGGATTGTGGAGTATTTCACCTTTACAATGGGGTATATGTCTCTACCAGGCATAGCCTATGTCAACAGAAGCCTCTCATGGAGATCTCTGTACCTCTGTACTTCAGTCCCTGCTCTGTTTTACTCTGTTCTCGCTTACTTCTTCATCACAGAATCACCCAGATGGCTTCTGATGCAGGGTAGAGTCAAAGAAGCCATGAAAATCCTCAAAGGGGTTACCTTATCAGAACACAACGCTAACTTCATAGAAACCTTGAAACCCAAAGAAAAGGTTTCAATCTTTCAACTCTACTCTTCAGTAGGTGAGCTTTTCAAGAAACGCTGGGCACTGACAAGAATGGTGGCGGTGATGGTGCTAGGAATCGGTGTCGGCATGGTGTATTTTGGGATGCCATTAGCGGTGGGGAACTTGGGGTTCAACATTTACTTGGCTGTTGTGTTCAGTGCATTGATGGAGTTTCCTTCTTGCATAGCCACCTATTTCTTGGAAAACTACAGAAGAAAGCCATCGATTTTTGTTTTCTCCTTGATGGGTGGGATTTGCTGTGTGATGTGTGCTGTTGTTGGTGATAAATCACCGGGTGCCAAAGTGGGGCTAGCAATGGTGTCGTTTTTTGGTGCTTGCACGGCTTACAATGTTTTCCTCATCTACATTATTGAGTTGTTCCCCACATGTGTGAGGAACACCACAACCTCATTGGTGAGACAAGCTATCACATTTGGTTGCATTTTCAGTCCTTTTTTAATATCTGCTGGGAGGAGAAACAACATCTTTTCTTATGGGGTGTTTGGGATTGTGATAATGTTATCCAATTTGACTTTGTTTGGGTTGCCTGAGACTATGGGGATTGTGCTTTGTGATACTATGAATCAGCAGGAGAAGAAGGAAACGTATTTGAGTAAATCTGAGACAAAGCAAGTTGCTATGTGTGAGAGTGAGACAATGGATCAACAAGAGAAGATTGGAGACTTGCCCGTGTGA 1626 0.444 MEPAASVQTTAPSQSPSSAAEHERKLMQSWDDMVEKSLGNFGWMEFLQAVLVAVAMFFDAQQSFISIYTDNYPTWHCNTNSNSNTTTCSSTSDICKIPRSSWSWDSHPSMTIISHWGLECASTFITGLPQSAFFIGCLLGSSVLAALADSALGRKNMLVFSCVSMSITSILIIFSPNIWVYSALKFLIGFWRSSIGTCVLVLLTENVSAEWRFRVGIVEYFTFTMGYMSLPGIAYVNRSLSWRSLYLCTSVPALFYSVLAYFFITESPRWLLMQGRVKEAMKILKGVTLSEHNANFIETLKPKEKVSIFQLYSSVGELFKKRWALTRMVAVMVLGIGVGMVYFGMPLAVGNLGFNIYLAVVFSALMEFPSCIATYFLENYRRKPSIFVFSLMGGICCVMCAVVGDKSPGAKVGLAMVSFFGACTAYNVFLIYIIELFPTCVRNTTTSLVRQAITFGCIFSPFLISAGRRNNIFSYGVFGIVIMLSNLTLFGLPETMGIVLCDTMNQQEKKETYLSKSETKQVAMCESETMDQQEKIGDLPV* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2486 541 MobiDBLite consensus disorder prediction 1 24 - -
Lja3g2486 541 Gene3D MFS general substrate transporter like domains 37 504 IPR036259 -
Lja3g2486 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 48 497 IPR020846 GO:0022857
Lja3g2486 541 MobiDBLite consensus disorder prediction 6 22 - -
Lja3g2486 541 Pfam Sugar (and other) transporter 89 500 IPR005828 GO:0016021|GO:0022857|GO:0055085
Lja3g2486 541 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 22 511 - -
Lja3g2486 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 22 511 - -
Lja3g2486 541 SUPERFAMILY MFS general substrate transporter 114 496 IPR036259 -
Lja3g2486 541 CDD MFS_OCT_plant 93 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2486 Lja-Chr3 31557528 31559529 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2486 8 510 Organic Solute Cotransporters AT1G16390 47.255 8.65e-177 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2486 - - lja:Lj0g3v0102079.1 829.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3129 3 59843909 59848522 Lja3g2486 3 31557528 31559529 PCT