Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3032 ATGGATCCACAACGTTCCTTGCACGTAGCAATGTATCCATTCCTAGCCCTTGGTCACCAAACAGCATTTCTCCAACTATCTGACAAGTTAGCCGAAAGAGGCCACAGAACCACATTCTTCACACCCAAAAAAGCACAAGCCAAGCTAGAGCCTTTCAATCATCACCCTCATCTCATCACTTTATTCACCATCACCCTTCCTCATGTTGAAGGTTTACCTTCTAATGCAGAATCCACCTCAGATGTGCCTTACCCTCTAATACCTCACATCATGACGGCAATGGATCTAACTCAACCTGACATAGAAACTCATCTTAATAACCTCAAACCTGACATTGTGCTCTATGATTTCACCCACTGGATGCCTACTTTGGCGCGACGTTTAGGCATCAAGGCCGTCCATTACTGCTCTGCGAGTTCTGCGATGATCAGTTACACTATTGCGCCAACAAGGAAAGGAACAAACGTAACTGAAACTGACCTCATGGAGCCTCCTCCAGGGTACCCTGATTCATCAATCAAGCTTCATTTACACGAGGCGCGAGCCTTTGCTGCGAAAAGAAGAGAAATCTTTGGCAGCAATGTTCTTTTCTATGATCGCCATAACAAGGCCATAAGTGAAGCTGATGCCTTGGGATACAGAACTTGCAGAGAAATTGAAGGTCCTTATCTTGATTACATTGAAAAGGAGTTCAAGAAACCTGTGCTCACTACAGGACCGGTTATACCGGAGCCACCTAATTCTGGTTTAGATGAGAAATGGGCTTCATGGCTTGGAGGGTTCAAACCAGGTTCAGTGGTTTATTGTTGTTTTGGAAGTGAATGCAATTTAAGACCAAATCAATTCCAGGAATTGGTGCTTGGTCTTGAGATCACTGGTTTTCCATTCTTGGCAGCTTTGAAACCCCCTTTTGGGTTTGAGTCTGTTGAACAAGCACTTCCAGAGGGGTTTGAAAAGAGGGTTCAAGGAAGAGGGATTGTTCATGGTGGATGGGTTCAGCAGCAATTGATTTTGGAACACCCTTCTCTGGGGTGCTTCATTACCCATTGTGGATCAGGTTCTTTGTCAGAGGCTTTGGTGAATAATTGTCAGTTGGTGCTGTTACCAAATGTTGGTGATCAGATTGTGAATGCAAGGATGATGGCCAACAACTTGCAAGTTGGGGTGGAAGTGGAGAAAGGTGAAGAAGATGGTTTGTACACCAAGGAAAGTGTGTGCAAAGCTGTGAGCATTGTGATGGATGATGAGAATGAAACCAGCAAAAACGTTAGAGCTAATCATGCTAGGCTTAGAGAGATGTTGGCTAACAAAGATTTAGAGTCTTCTTATATTGACAATTTCTGCAAGAAGCTTCAAGAGATTGTTGAGGATTAG 1374 0.4396 MDPQRSLHVAMYPFLALGHQTAFLQLSDKLAERGHRTTFFTPKKAQAKLEPFNHHPHLITLFTITLPHVEGLPSNAESTSDVPYPLIPHIMTAMDLTQPDIETHLNNLKPDIVLYDFTHWMPTLARRLGIKAVHYCSASSAMISYTIAPTRKGTNVTETDLMEPPPGYPDSSIKLHLHEARAFAAKRREIFGSNVLFYDRHNKAISEADALGYRTCREIEGPYLDYIEKEFKKPVLTTGPVIPEPPNSGLDEKWASWLGGFKPGSVVYCCFGSECNLRPNQFQELVLGLEITGFPFLAALKPPFGFESVEQALPEGFEKRVQGRGIVHGGWVQQQLILEHPSLGCFITHCGSGSLSEALVNNCQLVLLPNVGDQIVNARMMANNLQVGVEVEKGEEDGLYTKESVCKAVSIVMDDENETSKNVRANHARLREMLANKDLESSYIDNFCKKLQEIVED* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3032 457 CDD GT1_Gtf-like 7 445 IPR002213 GO:0008194
Lja3g3032 457 Gene3D Glycogen Phosphorylase B; 256 437 - -
Lja3g3032 457 PANTHER GLYCOSYLTRANSFERASE 5 454 - -
Lja3g3032 457 Gene3D Glycogen Phosphorylase B; 2 255 - -
Lja3g3032 457 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 330 417 IPR002213 GO:0008194
Lja3g3032 457 ProSitePatterns UDP-glycosyltransferases signature. 331 374 IPR035595 -
Lja3g3032 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 440 - -
Lja3g3032 457 PANTHER UDP-GLYCOSYLTRANSFERASE 79B30 5 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3032 Lja-Chr3 56619103 56620476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3032 7 457 Glycosyltransferase AT5G54010 45.133 2.33e-153 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3032 K22794 K12933 gmx:100780270 716.072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3080 3 58359239 58361017 Lja3g3032 3 56619103 56620476 PCT