Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3000 ATGACCACTATGGATGTAAAAGGCATAACTTGGGTTGGAAATATGTACCAGCAATTTGAGAATATGTGCCTGGAGGCAGAAGACGTTATGTACGAGGATACAGTTAAATACTTCGAGAATCAGATGCGGGTTGTTGGGGCAAGTGTTAAAAAGTTATATTCAGATATTGTTGAAGATTTGCTTCCTCCACTTTCATGTGGTTTGGATGAAAATGTAGACTCTGATACGTCTATAGATCAACATACTAATGTTGGGTTCTATAAGAAACCACTCGAAGATCTCAAGGAAAGACCTGTCAAGGCTAATACCAAGCAAATGACTCGGGATTCCAGGATTGATAGCGATGCCGTACATGCTGCATCGTATGATGGAACCCCAGAGACTGATGCTTCATTCATTTCATCTTCAAGAAATTCTGTCAAAGGAAGCAATGTTATTTCTCATTCAATACAATATGTTGGGAGCATGGATATTAAATCAAACATTGCTACTAATAACAATAAAATAAATAAGAAAATGGCTGCAACCAAGATATTCAATGAAGTCACTTTGGCAGAATCAGATACGTGCAGGACATCACAATCTTGTGAGATCTCAAATGAAAATGAAAATCTTGGAGTTAGTGTTTCAAAGCCAGCTTTGGGTGAAGTGGCTAGGCTTTCCTCTGCAGCAGATCATTGCAATGAAATTGACAATGCTAGTACTGAAGAATCCCCCAAGGTGCAAGTAGTAGTTAAATCAGCTGAAGAGAAACAGATTAATACGATTTCTTCTGTCCCATTTGGAGAGCCAGTTGGTTTCTCTATGGATAGAATGATACAGTCTGATGATTGTTCTAATAGCATGGTAGTTATATCTCATCCAGAGCAAGGCCATAAAACCATGCAACAAGGTCATCCAAGGCTTGAGGAAACTTGTGTTATGGTGACTGGAAATGAACTTCAATCAGTCCCCAAGGGAGGTGATAATCTGAAAAATAACAAGAAATGGAGGCGGGAAAGATTTTCTTTATCTAAGAAGTCTGCGAGAAAGCAAGAGTATAAGGAGCTTGCAGTATTGCATGGGAACAGTGAAAAAGTAAAGGGAGTCTGCATGGAGAGTTTAGATGCAACTTCACTGGAGGATCAAAAGAAGTTACTGCCTCTAAGCATGTCTGAACCTGAGTGGGAGATTCTTTAA 1179 0.3927 MTTMDVKGITWVGNMYQQFENMCLEAEDVMYEDTVKYFENQMRVVGASVKKLYSDIVEDLLPPLSCGLDENVDSDTSIDQHTNVGFYKKPLEDLKERPVKANTKQMTRDSRIDSDAVHAASYDGTPETDASFISSSRNSVKGSNVISHSIQYVGSMDIKSNIATNNNKINKKMAATKIFNEVTLAESDTCRTSQSCEISNENENLGVSVSKPALGEVARLSSAADHCNEIDNASTEESPKVQVVVKSAEEKQINTISSVPFGEPVGFSMDRMIQSDDCSNSMVVISHPEQGHKTMQQGHPRLEETCVMVTGNELQSVPKGGDNLKNNKKWRRERFSLSKKSARKQEYKELAVLHGNSEKVKGVCMESLDATSLEDQKKLLPLSMSEPEWEIL* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3000 392 PANTHER BNAA05G11610D PROTEIN 4 392 - -
Lja3g3000 392 PANTHER - 4 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3000 Lja-Chr3 55768030 55775330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3000 - - mtr:MTR_4g079720 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3000 3 55768030 55775330 Lja3g3000 3 55768030 55775330 ECH
Lja3g3000 3 55768030 55775330 Lja3g3000 3 55768030 55775330 PCT
Lja3g2968 3 54557312 54561109 Lja3g3000 3 55768030 55775330 PCT