LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g2968	ATGATACTGAACATTCTAATGGAAGAAAATCAGTTAGATTTCAATCAGCCACTTTTATCAGTGAGGCGGTTCTCATCGACAGTGACATCTGAAAATGAGAATAAAAGGAAAATTAATAAGTCAGAAGCCAAACGACCTCCTCTTCCTACTTACAAATCAGAGTTAAAATCAGGTCCAGTGAGTAACCCGGGAACAGTTCCTTTCGAGTGGGAGAAAACTCCTGGAAGACCTAAGAATGAAAGCAAATTACAAACAAAGGCTATCGAACGGCCTTATATGTCTCCGAAGCTTCCACCTGGGAGGGTCGTAAAAGCTGAACAGCAATACTTTGATAAAGTTCCTAAAGGCGCATCAGTAACTCAGTCCAGAACAGAAAGTGCCCCTTCCGACTCGCATAGTGTTTCATCTTGGGATGATAAAGTGAGAAAACATAAAAGCAGAAAAGAAATTGTTCAGGAAAATGAAAGTTCTGTTTCCGATGATGGGGATGAGGCCTATCTAGATGCTCTTGACACGCTTTCTAGATCAGAATCATTCTTCATGAACTGTAGTGTGAGTGGCTTGAGTGGATGGGATGATCAAGAAGTCCAACCGTCGGAAAGTTTTTCGACAGATCAACAGGCTCGTGATTTCATGATTGGGAGGTTCTTGCCGGCAGCAAAGGCAATGGTTTCGGAAACACCTCCAGTTCAATACAACTCTAGGAAGCCAATTGTTAAACAAGAACAGCAACCTAGACACTTAAGGAAAGTGGTAACTGGAGCAAATTCCCATCCTCTTAATCAGAAATGGCAGAAGGTTTTGCCACATTATGCCCAAGATATTGATAGAGAAGAAAGTGAAGATGAAAGTGGTGATGATGATGATGATAGATCTGAAAACTATTCAGCCAAAATTTGCGGGCTATTTCCTCGATTCTGCCTTTTGAATCCAATACCAGGATTAAGAATGAATGATAGGATTCTAAGTTCTGCGGATGATCGAGTGCCGGGTAAATCATTTGCATCTCACAGAAGAACTTCAAAAGAGCATGCTAGAACTGCTAATTATGGGAAAAGATCAGTAGAGTCCCAATCTGGCTCTACAAAAGAGAAAGATTTTCTCAGTGTTACAGAAAATTCTAAGCACGGCATTGATCCACATCGAAAAGGTTTTAGCACACCATTCGCTCGTGAGGGAAATCAAAATGAATCAAGCTCTGAAAGCCCCGTTGCTGAGAAAACTCTGTATGTAGATTCTGTGCAGATGGTTAAATCTTCATCTTCTGAAATGAAAGGTCCAACCAATCAAGGAGGGGACGATTTCGACACTTTAACAAAAGACGGTAGCATTTTTAAAACTCCTTGTATAGATTCTTCAATTGAGGATAGCAATGACTTGGGTGTTGTGGATGAGAAGGAGGCATTACATCCTAAAAGTTCAGTGTCTCTTGAATCATTGCTCCTGGTTCGTTCTGATAATTATACTGATGATATGCAAATGAAAATGAGAAATCTTTCCAACAAAATGGATTCAAAAAAGCAAGGGTTGACAAAGCCTGATTACCAAAGTAAATTAAATCGAAATTTGGTTGTGATTTCAAGTCCAGAAACGGTGAAGTACAAGAAAATAGAGTCCGAAAACAAATTTTCTAGCAGTGAAAAAAGTTCTGGTGGCCTAATTCAGAATCCTGTTTCATGGAGAAACTCAAAAGAGGGTAATGATTCAGAATTTGATCAACAAAGCATTCGTGACTCTAATGAAAACCAACCACCTATGAAATTAGACAATGGAGAGACATCATATGCTTGCTCTATGAAGCTTCCTCTTGCCCTTCCTTTACCGAAAGCTCCTTCAGAGTCTTGGCTTAAGCGTACTTTACCTACAGTTTCCTCAAGGAATACATCTTCGTGGTCAAATCTCGCTTCCAACATTCATGTACCATCTCAAGCTCCCAAGACAGCATCACTGGATCCTAAGTGGGAAATTATCGTTAAATCTTCGAATGTTCATCGCGGGCATCTGCGGTTTGCTGAGGAATTAACACCCATTCCTGAAGCCTGA	2043	0.4033	MILNILMEENQLDFNQPLLSVRRFSSTVTSENENKRKINKSEAKRPPLPTYKSELKSGPVSNPGTVPFEWEKTPGRPKNESKLQTKAIERPYMSPKLPPGRVVKAEQQYFDKVPKGASVTQSRTESAPSDSHSVSSWDDKVRKHKSRKEIVQENESSVSDDGDEAYLDALDTLSRSESFFMNCSVSGLSGWDDQEVQPSESFSTDQQARDFMIGRFLPAAKAMVSETPPVQYNSRKPIVKQEQQPRHLRKVVTGANSHPLNQKWQKVLPHYAQDIDREESEDESGDDDDDRSENYSAKICGLFPRFCLLNPIPGLRMNDRILSSADDRVPGKSFASHRRTSKEHARTANYGKRSVESQSGSTKEKDFLSVTENSKHGIDPHRKGFSTPFAREGNQNESSSESPVAEKTLYVDSVQMVKSSSSEMKGPTNQGGDDFDTLTKDGSIFKTPCIDSSIEDSNDLGVVDEKEALHPKSSVSLESLLLVRSDNYTDDMQMKMRNLSNKMDSKKQGLTKPDYQSKLNRNLVVISSPETVKYKKIESENKFSSSEKSSGGLIQNPVSWRNSKEGNDSEFDQQSIRDSNENQPPMKLDNGETSYACSMKLPLALPLPKAPSESWLKRTLPTVSSRNTSSWSNLASNIHVPSQAPKTASLDPKWEIIVKSSNVHRGHLRFAEELTPIPEA*	681

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	135	155	-	-
	Lja3g2968	680	PANTHER	N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED	7	353	-	-
	Lja3g2968	680	PANTHER	N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED	350	678	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	326	350	-	-
	Lja3g2968	680	PANTHER	N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED	7	353	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	25	99	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	544	564	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	368	386	-	-
	Lja3g2968	680	Pfam	Protein of unknown function (DUF688)	7	366	IPR007789	-
	Lja3g2968	680	PANTHER	N-METHYLTRANSFERASE, PUTATIVE (DUF688)-RELATED	350	678	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	114	134	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	113	162	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	351	367	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	540	593	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	29	49	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	326	407	-	-
	Lja3g2968	680	MobiDBLite	consensus disorder prediction	389	406	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g2968	Lja-Chr3	54557312	54561109	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g2968	-		-	gmx:100812760	775.007

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja3g2968	3	54557312	54561109	Lja3g2968	3	54557312	54561109	ECH
	Lja3g2968	3	54557312	54561109	Lja3g2968	3	54557312	54561109	PCT
	Lja3g2968	3	54557312	54561109	Lja3g3000	3	55768030	55775330	PCT