Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2831 ATGTCTGCAATTTTCCGACAATACACCTTTGATGACTCATTCCAACAAGTCTTCATCTCCCCCAAATTCCTCAAGGAATACCAGATTGCTCTCACCTTCGCCACCGACTACGACGACAACGACGCTGCCACCAACGGCGTCTTCCGCCCCACCTGGGACCAAACCAAAGTCACACCAGAAGCAATCGAACGCTTCAAAAGAAACCACCCCGGCGTCAGCATCAAGGTCTACATCACCATCGGAAACCGCCGCAACCACCGCCCCTTCCACCCACTAGACACCTCATCATGGATCCAAAACGCCACCGAATCACTCACCGCAATCATAAAAAACAAAGACTACAACCTCCAAATCGACGGCATCGACGTGCTGTACGAAGGCATTGATGCCTCACCAAGTGATTTTACAGAGTGTGTCGGGAATGTGATAAAGAATTTGAAAGAAAGTGGAACCATCACAGAAGCTTCGATTTCTCCATCGTTTGGGTTGAACAGAGATTTTTACTTCAAATTGTACAGCAGTTTACCGTTGCTGATTGACTATGTGGATTACCAGTTCCAGAATGAGGTTGCCCCTGTTTTTGCACCCAATGTTCTGGTGGGGCTGTTCGAGAAGCTTGTGAAGGGGTTTTATCCGAGGTGCAAGGTGTTTGCTGGGTACAGTGCGGAGAATGAGGATTGGGGTTCGTTGTCGCCGATTGTGTTCTTTCTGGGAGGCATGGATATTCTGAAGAAGAGGAAAGGTATTGGAATTTCCATTCATTACCATAATTACTACCAGGAAGCTTCACATGACGAATGA 801 0.4757 MSAIFRQYTFDDSFQQVFISPKFLKEYQIALTFATDYDDNDAATNGVFRPTWDQTKVTPEAIERFKRNHPGVSIKVYITIGNRRNHRPFHPLDTSSWIQNATESLTAIIKNKDYNLQIDGIDVLYEGIDASPSDFTECVGNVIKNLKESGTITEASISPSFGLNRDFYFKLYSSLPLLIDYVDYQFQNEVAPVFAPNVLVGLFEKLVKGFYPRCKVFAGYSAENEDWGSLSPIVFFLGGMDILKKRKGIGISIHYHNYYQEASHDE* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2831 266 SUPERFAMILY (Trans)glycosidases 28 242 IPR017853 -
Lja3g2831 266 PRINTS 2-S globulin family signature 103 125 IPR000677 -
Lja3g2831 266 PRINTS 2-S globulin family signature 62 80 IPR000677 -
Lja3g2831 266 PRINTS 2-S globulin family signature 19 38 IPR000677 -
Lja3g2831 266 PRINTS 2-S globulin family signature 45 60 IPR000677 -
Lja3g2831 266 PRINTS 2-S globulin family signature 177 200 IPR000677 -
Lja3g2831 266 PANTHER CHITINASE 2-LIKE 2 263 - -
Lja3g2831 266 Gene3D Glycosidases 2 265 - -
Lja3g2831 266 PANTHER RUBISCO-ASSOCIATED PROTEIN 2 263 - -
Lja3g2831 266 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 266 IPR001223 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2831 Lja-Chr3 43536209 43537009 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2831 - - gmx:100776259 372.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2831 3 43536209 43537009 Lja3g2831 3 43536209 43537009 ECH
Lja3g2831 3 43536209 43537009 Lja3g0775 3 7859090 7865915 PCT