Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0775 ATGGAACTTCCTATTCCAAACCTTTGCTTTACCCTTTTCTTCTTCTTATTTCTTGCAACAACCAACGCAAGCTTATTCCGAGAATACATAGGAGCAGAGAACAATGTCAAATTTTCAGATGTTCCTATTAACCAAGATGTCGAATTTCACTTCATTCTCTCCTTTGCTATTGACTATGACACATCATCATCTCCTTCTCCCACAAATGGAAAATTCAACGTTTTTTGGGAAACAGAAAACCTAACCCCAACCCAAGTTTCTTCCATCAAGAGCAAGAACTCAAATGTCAAAGTAGCCATGAGTCTTGGAGGAGATAGTGTTGAAGGTGGCTCTGCTTACTTTGATCCATCTTCAGCTGATTCTTGGGTTTCCAACGCTGTTTCTTCGCTCACAAACATAATTAAGGAGTACAACTTGGACGGAATCGACATTGACTATGAGCATTTCAAAACAGACCCTGAAACATTTGCTGATTGCATAGGGAGGGTAATCAAGACTCTTAAAGCCAATGGGGTTATCTCTTTTGCTTCAATTGCTCCATTTGATGATGATCAGGTTCAGAGTCATTACATGGCCTTGTGGAAGAGTTATGGGAACCTCATTGATTATGTTAATTTCCAATTCTATGCATATGACAAGGGTACTAGTGTGGATCAGTTTATTGATTACTTCAACAAGCAAAGTGCAAATTACAATGGTGGGAAGGTGTTGGTGAGTTTCATTAGTGATGGGAGTGGTGGGTTGTCACCAAATGATGGATTCTTCACGGCATGCCATAGGCTGAAGAGTCAGCAAAAGCTTGATGGTATCTTTGTGTGGTCTGCTGATGATTCTATGGGAAACGGTTTCCCCTATGAGAAGCAATCCCAAGCTCTTTTGGCTATACCGTAG 891 0.4063 MELPIPNLCFTLFFFLFLATTNASLFREYIGAENNVKFSDVPINQDVEFHFILSFAIDYDTSSSPSPTNGKFNVFWETENLTPTQVSSIKSKNSNVKVAMSLGGDSVEGGSAYFDPSSADSWVSNAVSSLTNIIKEYNLDGIDIDYEHFKTDPETFADCIGRVIKTLKANGVISFASIAPFDDDQVQSHYMALWKSYGNLIDYVNFQFYAYDKGTSVDQFIDYFNKQSANYNGGKVLVSFISDGSGGLSPNDGFFTACHRLKSQQKLDGIFVWSADDSMGNGFPYEKQSQALLAIP* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0775 296 ProSitePatterns Glycosyl hydrolases family 18 (GH18) active site signature. 139 147 IPR001579 GO:0004553|GO:0005975
Lja3g0775 296 PANTHER 2, PUTATIVE, EXPRESSED-RELATED 18 294 - -
Lja3g0775 296 CDD GH18_narbonin 25 278 - -
Lja3g0775 296 PANTHER CHITINASE 2-LIKE 18 294 - -
Lja3g0775 296 SUPERFAMILY (Trans)glycosidases 25 288 IPR017853 -
Lja3g0775 296 Pfam Glycosyl hydrolases family 18 50 216 IPR001223 GO:0005975
Lja3g0775 296 Gene3D Glycosidases 23 295 - -
Lja3g0775 296 PRINTS 2-S globulin family signature 256 275 IPR000677 -
Lja3g0775 296 PRINTS 2-S globulin family signature 86 104 IPR000677 -
Lja3g0775 296 PRINTS 2-S globulin family signature 69 84 IPR000677 -
Lja3g0775 296 PRINTS 2-S globulin family signature 23 36 IPR000677 -
Lja3g0775 296 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 24 296 IPR001223 GO:0005975
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0775 - - lja:Lj3g3v3120810.2 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0775 3 7859090 7865915 Lja3g0775 3 7859090 7865915 ECH
Lja3g2831 3 43536209 43537009 Lja3g0775 3 7859090 7865915 PCT