Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2808 ATGGAAGATCAACTGGGTTCCATATGCGATCTTCATGAGGGCTATGAGCAATTGAGGCAAAAGCTCTTTGACACAATGCTCGAACTCGAAACCATGAGGAACGTGAAAGCAGAACTCTCCAAACTGCTGCAAATAGCTTACCAAGAGAGGGATCAAGCAAGAGAACAACTTCATAGCCTCGCGAAAAAGCTCGTTCCCGCCAACTCAAACGCGCTTTTAGAGAATCTTCCGGAGTTTCCACCCGCGATCAAAGCGAACTCAAGCTTCACAAAATCAAACAGCCCCTCAAACATCTCATCATCCCCTGTGACTCCTCTGTTGCAGCCAGTTTCTCCTTCTCCCGAGTTTTCAAACGTGAATGTGAATGTTGTTGACAATCACTACAACTTTGGTTTCCAGAAGCCTGCAACAATTGATTTTGAAAGTTCTGTGATTGATTACCTTGCAAAGGGAAAGGTGTTGCCTCAGAAGGGAAAGCTAGTTGAGGCTGTGAGAGATGCTGGTTCTCTGCTTGAGACTCTGCTTGTGGCTGGGCCACTTCCAAAGTGGCGAAATCCACCTCCATTGACTTCCCTCAAGATTCCTCCTCTTAATATCAAGGAATATGATTCTCTTACTCCTGCGAGCAAGCTCAACTCCTTTGGAAATTGGTGGGATTCGGCTCAGAAACCAACGTTTCTTCCATCCTCTCATTCTTCAGAACCTCTACCAATGCTTAACTTTGCAGGCAGCTCCTTTGGCTCCTGGAACAAACAATTGCAGATGACATCAAAAGCTAGTGTTGCAAGGAATCAGCATAGACTTCAATATTGA 813 0.4539 MEDQLGSICDLHEGYEQLRQKLFDTMLELETMRNVKAELSKLLQIAYQERDQAREQLHSLAKKLVPANSNALLENLPEFPPAIKANSSFTKSNSPSNISSSPVTPLLQPVSPSPEFSNVNVNVVDNHYNFGFQKPATIDFESSVIDYLAKGKVLPQKGKLVEAVRDAGSLLETLLVAGPLPKWRNPPPLTSLKIPPLNIKEYDSLTPASKLNSFGNWWDSAQKPTFLPSSHSSEPLPMLNFAGSSFGSWNKQLQMTSKASVARNQHRLQY* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2808 270 PANTHER HIGH MOBILITY GROUP BOX PROTEIN, PUTATIVE (DUF1635)-RELATED 1 258 - -
Lja3g2808 270 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 258 IPR012862 -
Lja3g2808 270 Coils Coil 36 63 - -
Lja3g2808 270 MobiDBLite consensus disorder prediction 87 106 - -
Lja3g2808 270 Pfam Protein of unknown function (DUF1635) 15 206 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2808 Lja-Chr3 42529923 42531606 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2808 - - lja:Lj0g3v0081119.1 512.686
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2808 3 42529923 42531606 Lja3g2808 3 42529923 42531606 ECH
Lja3g2808 3 42529923 42531606 Lja3g0750 3 7615171 7616911 PCT