Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0750 ATGGAAGACCTGGGTTCCATATTCATTTATGAGGAGAGTGAACAGGAGTTGAGGCAGAAGCTTGTGGACACCACACTTGAGCTTGAAACTATGAAGAATGTTAAGGTGGAACTCTTCAATCTGCTGATGATGGCTTACCAAGAGAGGGATGAAGCAAGGTTTCAGGTTCAAAAGCTAATGAACAAGCTCATCATGCCCTCTTCTACCCCAATCCCTTTGCAAAATGTGCCTGGTGGAGTCCTGCATCAAGAGAACCTTCTCACAATGTTTCCTTCTGCTAAAGCAAATCCAAGCATCACTGAATCCAATAGCCTCTCACATGGTTCCCCACCAGTGGATTCATTCTTTGACAATGTTTCTTCTCCTCAAGAGTTCTCAAACATCAATGCAGTTGACAACAACAGCAACATGAGTTATCTCAAACAACAACATATGGTTCAAGACTTCAATTTGGTCTCATCAGAGAATCCTGCTTCTGATCCAGCAAGTGCTGTTATAGAATGTCTTGCTAAAGAAAAAGTCTTGCCTCAGAAGGGGAATCTCCTTCAAGCTGTGATAGATGCTGGTCCATTACTTCAGACTCTCCTCCTTGCAGGGCCACTTCCTTCTTGGCAAAATCCTCCTCCATTGGGAGACATCAAGGTTCCATCTTTGAACATCAAAGAGCATACCACTATCACCATTGAGCCAAATTCCTTTGTAGAAAATAGTAATTTGCTTTTGAAACCAAAGCTTCCATCTTTACAGTCTTCAAATGCTCTCTCCACTTGTTCTGCTTCCATGCTCAACTTTTCTGGCCATTCTCATTCCCTTGGTTCATGGAACAATCCATGGAAGTTCCAAGCCCCATCAAGGAAGCGGCAAAGGCATCATTGA 876 0.4315 MEDLGSIFIYEESEQELRQKLVDTTLELETMKNVKVELFNLLMMAYQERDEARFQVQKLMNKLIMPSSTPIPLQNVPGGVLHQENLLTMFPSAKANPSITESNSLSHGSPPVDSFFDNVSSPQEFSNINAVDNNSNMSYLKQQHMVQDFNLVSSENPASDPASAVIECLAKEKVLPQKGNLLQAVIDAGPLLQTLLLAGPLPSWQNPPPLGDIKVPSLNIKEHTTITIEPNSFVENSNLLLKPKLPSLQSSNALSTCSASMLNFSGHSHSLGSWNNPWKFQAPSRKRQRHH* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0750 291 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 275 - -
Lja3g0750 291 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 275 IPR012862 -
Lja3g0750 291 Pfam Protein of unknown function (DUF1635) 13 238 IPR012862 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0750 Lja-Chr3 7615171 7616911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0750 - - lja:Lj3g3v3154070.1 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0750 3 7615171 7616911 Lja3g0750 3 7615171 7616911 ECH
Lja3g2808 3 42529923 42531606 Lja3g0750 3 7615171 7616911 PCT