Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2776 ATGTCACTCCAGTTGAACAAGAACAACAGCAGCAACACGGGAACACCTTTGTTCCATGTATTTAAGAAGCAAGCTTCTTTCTTCTTCAAGGAGCAATTCAAGAGTGCTAGATTAGCTCTCTCTGATGTCACCCCTGCACAACTGATGACAGAAGAAGCTACAAATGGAAAAAATCCATGGGCCCCAAATTCCCCATCACTCAGATCAATTTCAAAGGCTGCTTTTGAGCTAGATGATTATTGGAGGATTGTAGAGATTCTGCACAAAAGACTGCTTAAATTTGACAATGGGAATTGGAGGGCCTCTTACAATTCTCTGATTGTGCTTGAGCACCTGTTGACTCATGGACCTGAAAGTATTGCAGAGGAATTTCAGAGTGACAAAGATGTTATTAGTCAGATGATAAACTTTCAGTATATTGATGACAAAGGGTTCAACTGGGGCCTAATTGTTAGAAAGAAGTCAGAGAGGATATTGAAACTTATGGAAGAAGGAACTGTACTTAAGGAAGAAAGAAACCGTGCTCGAAGGTTGTCCAGAGGAATTCAAGGTTTTGGTAGTTTCTCCAAACGACCAACTCCAGAACAATGCATTCTGCAGGAAAAATCTTTGCCTGACACATTTGGCCGATGTAACTTTGAATTCAACAACCATGAAAATCAGGAACACCAGTCCTCTTTCTCGAACCATATTCTGGAAACAGCAGCAGTTAAGTCTCCTAGTCTTAGTCATCATGGGGGAGTTCTCAATTCAGTGGATGGTGTAGGAACTGAAAGCTACATGGATGATCTGAGAAACAATGAAATGCTCAATGAATCTGACACAAGCTCTAATGAAAACATGATTCCTGGCAAGGAGGTATGCCATCTGTGGAGCCTGAAAGGGGAGTCCAGTCTACTTTTGGAGGGTAACCAAGAAGATTCCAGAATCCAAACATTCATAGCAGAAGAGGATCACCCCTTTAGCTCAGCAGAACTGCATTCCACTTCTTCCCTTCTTTCTTCAAGATGA 1011 0.4174 MSLQLNKNNSSNTGTPLFHVFKKQASFFFKEQFKSARLALSDVTPAQLMTEEATNGKNPWAPNSPSLRSISKAAFELDDYWRIVEILHKRLLKFDNGNWRASYNSLIVLEHLLTHGPESIAEEFQSDKDVISQMINFQYIDDKGFNWGLIVRKKSERILKLMEEGTVLKEERNRARRLSRGIQGFGSFSKRPTPEQCILQEKSLPDTFGRCNFEFNNHENQEHQSSFSNHILETAAVKSPSLSHHGGVLNSVDGVGTESYMDDLRNNEMLNESDTSSNENMIPGKEVCHLWSLKGESSLLLEGNQEDSRIQTFIAEEDHPFSSAELHSTSSLLSSR* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2776 336 ProSiteProfiles ENTH domain profile. 38 172 IPR013809 -
Lja3g2776 336 CDD ENTH 46 163 - -
Lja3g2776 336 SMART enth_2 44 172 IPR013809 -
Lja3g2776 336 Pfam ENTH domain 44 164 IPR013809 -
Lja3g2776 336 SUPERFAMILY ENTH/VHS domain 24 172 IPR008942 -
Lja3g2776 336 PANTHER EPSIN/ENT-RELATED 16 335 - -
Lja3g2776 336 PANTHER EPSIN-2-LIKE 16 335 - -
Lja3g2776 336 Gene3D - 38 185 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2776 Lja-Chr3 41483450 41485720 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2776 K12471 - gmx:100812797 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2776 3 41483450 41485720 Lja3g2776 3 41483450 41485720 ECH
Lja3g2776 3 41483450 41485720 Lja3g0718 3 7182302 7184264 PCT