Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0718 ATGAGCTTCTATGATTTCAAAAAGCAAGCTTCTTTCTTCCTCAAGGAGAAACTCAAGACTGCTAGATTAGCTCTCACAGATGTCACCCCTGCAGAACTGATGACAGAAGAGGCAACCAGTGAAAATCCATTGGTTCCAGATTCACCAACTCTCAGATCAATCTCAAGGGCTGCTTTTGAGCTTGATGATTATTGGAGGATTTTAGAGATTCTGCATAAAAGACTGCTTAAATTTGAAAAGAAGAATTGGAGGGCCTCTTACAATTCCCTGATTGTGCTTGAGCACCTGTTGACTCATGGACCAGAAAGTGTTGCAGAGGAATTTCAAGGTGACAAAGATGTCATCACCCAACTGAAAGGCTTTCAGTATATTGATGACAGTGGGTTCAATTGGGGCTTAACTGTCAGAAAGAAATCAGAGAGGGTGTTGAAACTGCTGGAAAAAGGAACTCTTCTCAAGGAAGAGAGAAACCATGCTAGAAGGTTATCTAGAGGAATTCAAGGTTTTGGAAGCTTCCCCCAACGTTCAGCTCCAGCACAAGGCATTCTACGCGAGAAATCATTGCCAATCACACTTGGCAGATGCAACTCAGACTTAGAAAACAATGAAGATAATGAAAACAAGTCCACTAGCTCAAACAATGGAATGGACACAGCTTCTGTCAAAACTGATAGCCATGAAGGAGGACTTTTGAAGTCTCTGGATAGTGTGGAAACCAAGAGATACCAGGATGATCTTGGCGAAACTGTAATAAGTTCTAAAGAAAACTTGAAACCTAGCAGGGAGGAATTCCATCTGTGGAATTTGAAAGGGGAATCCAGGTCACTTCTGGATTGTGGAGAAGATGATTCCGGGCTTGGCATCTCCGGAACAGAAGATAATCACCCTTTTAATTCAACAACAGAAATGCATGTCACTGCCTCCTTGGTTTCTTGCTAG 939 0.4228 MSFYDFKKQASFFLKEKLKTARLALTDVTPAELMTEEATSENPLVPDSPTLRSISRAAFELDDYWRILEILHKRLLKFEKKNWRASYNSLIVLEHLLTHGPESVAEEFQGDKDVITQLKGFQYIDDSGFNWGLTVRKKSERVLKLLEKGTLLKEERNHARRLSRGIQGFGSFPQRSAPAQGILREKSLPITLGRCNSDLENNEDNENKSTSSNNGMDTASVKTDSHEGGLLKSLDSVETKRYQDDLGETVISSKENLKPSREEFHLWNLKGESRSLLDCGEDDSGLGISGTEDNHPFNSTTEMHVTASLVSC* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0718 312 CDD ENTH 31 147 - -
Lja3g0718 312 Gene3D - 25 172 IPR008942 -
Lja3g0718 312 ProSiteProfiles ENTH domain profile. 23 156 IPR013809 -
Lja3g0718 312 MobiDBLite consensus disorder prediction 206 221 - -
Lja3g0718 312 MobiDBLite consensus disorder prediction 194 231 - -
Lja3g0718 312 PANTHER EPSIN/ENT-RELATED 3 220 - -
Lja3g0718 312 SUPERFAMILY ENTH/VHS domain 9 156 IPR008942 -
Lja3g0718 312 SMART enth_2 29 156 IPR013809 -
Lja3g0718 312 Pfam ENTH domain 29 150 IPR013809 -
Lja3g0718 312 PANTHER EPSIN-2-LIKE 3 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0718 Lja-Chr3 7182302 7184264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0718 K12471 - gmx:100811093 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0718 3 7182302 7184264 Lja3g0718 3 7182302 7184264 ECH
Lja3g2776 3 41483450 41485720 Lja3g0718 3 7182302 7184264 PCT