Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2762 ATGGAAAACGGGGATCACTTCCAGGAAATTTCAAACCCCAAATATGATTGTCTTCTATTTGATCTTGATGATACCCTTTATCCATTTAGTTCTGGTTTATCAGCACATGTGACAAAAAACATTCGAGATTACATGATTCAAAAGCTTGGGATAGAGGATGGTATAGTTCCTGAATTGTGTGTTTCGTTGTATAAAACTTATGGGACGACAATGGCTGGTCTCAAGGCAATTGGCTATGACTTTGACTATGATGACTTTCATGGCTTTGTCCATGGGAGATTGCCATATAGTATACTGAAACCTGACCCTGTTCTGAGGGGAATTTTGCTGAGCTTGCCTATTCGAAGAATTGTTTTCACTAACTCTGATGATGCCCATGCTAGCAGAGCGCTTCACAGGCTTGGACTGGAGGGTTGCTTTGAAAGAATCATAAGCTTTGAAACTCTGAATCCCTCCAAGAACTTAGATATTCCTGACAATAAAGATGGTAGTGATCAACCAAGTTCCAAAGGAATTTTTAATTTCCATGAGTACATTTGCAAGCCTGATCCTGATATCGTGCTTCCAAAGACCCCGGTTGTCTGCAAACCCTCCCAAGATTCATTTGAAAAGGTTTTCAAGATGGCAAATATTGACCCTAAAAAAACATTGTTCTTTGATGACAGTATCCGCAATATAAAGACGGGCAAATCCTTGGGCCTCCACACAGTCTTGGTCGGTACCTCCGTTCGAACTGCAGGAGTGGATCATGCCTTGGAAAGTATCCATAATATGAAGGAGGCATTTCCAGAACTGTGGGACGCCAATGGGAAGCCTGAAAGTGTCAAGTATACTAGAAAGGTTTCTGTTGAAACGGCAGTAAAAGCTTAA 870 0.4126 MENGDHFQEISNPKYDCLLFDLDDTLYPFSSGLSAHVTKNIRDYMIQKLGIEDGIVPELCVSLYKTYGTTMAGLKAIGYDFDYDDFHGFVHGRLPYSILKPDPVLRGILLSLPIRRIVFTNSDDAHASRALHRLGLEGCFERIISFETLNPSKNLDIPDNKDGSDQPSSKGIFNFHEYICKPDPDIVLPKTPVVCKPSQDSFEKVFKMANIDPKKTLFFDDSIRNIKTGKSLGLHTVLVGTSVRTAGVDHALESIHNMKEAFPELWDANGKPESVKYTRKVSVETAVKA* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2762 289 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 289 - -
Lja3g2762 289 Gene3D - 81 266 IPR023214 -
Lja3g2762 289 Pfam HAD-hyrolase-like 196 248 - -
Lja3g2762 289 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 239 IPR010237 -
Lja3g2762 289 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 289 - -
Lja3g2762 289 SUPERFAMILY HAD-like 17 243 IPR036412 -
Lja3g2762 289 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 268 - -
Lja3g2762 289 CDD HAD_5NT 17 241 IPR010237 -
Lja3g2762 289 SFLD C1.5.3: 5'-Nucleotidase Like 12 268 IPR010237 -
Lja3g2762 289 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 191 239 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2762 Lja-Chr3 40872197 40874614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2762 K07025 - gmx:100790444 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2762 3 40872197 40874614 Lja3g2762 3 40872197 40874614 ECH
Lja3g2762 3 40872197 40874614 Lja3g0698 3 6959420 6961902 PCT