Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0698 ATGGAAAACGGGCAAGTTTCAAACCCAAAATATGATTGTCTTTTATTTGATCTCGATGATACCCTTTATCCCTTGAGTTCTGGAATATCAGCGCAGATAGCAAAAAATATTCAAGAGTACATGCTTCAAAAACTTGGGGTAGAGCCTGCTAAAGTTTCCGAATTGAACTTTTCATTATACAAGACCTATGGGACAACAATGGCTGGTCGAAGGGCAATTGGTTATGACATTGACTATGATGACTTTCATAGTTCTGTTCATGGGAGGTTGCCGTATAAAAGTCTACTGAAGCCGGATCATGTTCTCAGGGGCATTTTGCTAAGCCTTCCTGTTAGAAAAATTATTTTTACCAATGCAGACACTGCTCATGCAGTGAGAGCGCTTCGAAGCCTTGGACTGGAGGACTGCTTTGAAAGAATTATAAGCTTTGACACTCTGAATTCCTTCAACAACATCACTCCGAATGATGGCAAAGATTGCAGTGAAATGAAACCAGTCACTGCAGAAATTTTTGATTTTTGCGAGTACACGAGAGGGACTGATTATGATAAGGTGCTTCCTAGGACACCAGTTGTCTGTAAACCCTTTGAAGATGCATTTGAAAAGGCTTTCCAGTTGGCTGACATTGACCCTCAGAGAACATTGTTCTTTGAGGACAGTATCCGCAATTTACAGACAGCCAAGCGCTTGGGCCTCCACACAGTCGCGGTGGGTACATCTGTTCGTAGTACTGGAGTGGATCATGCATTAGAGAGTATCCATAATATCAGGGAGGCATTTCCAGAGCTATGGGAGGTTGATGAGAAGCGTGAAATTGTCAAGTATAAAGTTGCAGTTGAAACAACAGTGGAAGCATAG 858 0.4207 MENGQVSNPKYDCLLFDLDDTLYPLSSGISAQIAKNIQEYMLQKLGVEPAKVSELNFSLYKTYGTTMAGRRAIGYDIDYDDFHSSVHGRLPYKSLLKPDHVLRGILLSLPVRKIIFTNADTAHAVRALRSLGLEDCFERIISFDTLNSFNNITPNDGKDCSEMKPVTAEIFDFCEYTRGTDYDKVLPRTPVVCKPFEDAFEKAFQLADIDPQRTLFFEDSIRNLQTAKRLGLHTVAVGTSVRSTGVDHALESIHNIREAFPELWEVDEKREIVKYKVAVETTVEA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0698 285 SUPERFAMILY HAD-like 13 241 IPR036412 -
Lja3g0698 285 Gene3D - 105 271 IPR023214 -
Lja3g0698 285 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 7 266 - -
Lja3g0698 285 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 5 285 - -
Lja3g0698 285 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 182 237 IPR006439 -
Lja3g0698 285 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 12 236 IPR010237 -
Lja3g0698 285 SFLD C1.5.3: 5'-Nucleotidase Like 7 266 IPR010237 -
Lja3g0698 285 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 5 285 - -
Lja3g0698 285 Gene3D - 3 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0698 Lja-Chr3 6959420 6961902 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0698 K07025 - gmx:100807717 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0698 3 6959420 6961902 Lja3g0698 3 6959420 6961902 ECH
Lja3g2762 3 40872197 40874614 Lja3g0698 3 6959420 6961902 PCT