Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2701 ATGGCTCCTGCAACCGCTACCACCACCACCGCACAAATTTTCAGCAACAATGGCAACAACCCTGAGTTTAGCAGGCAAGAAATCCAATCCGCCATAGCCAAAGCAGTGGAGCTAAGAGCCCTTCATGCTGCACTAACGCAAGGAACTAGCCCAAATGCTAGAAGATTCTCTTCCCCTTCCCCTGCTTCACGCTCTGCTTCTCAGTTTTCAGCTCAAGATTACCCTGTTTTCACACCAAGCTATGAGGATGAGCCACATCAAAGCCCAAAATCAGAAAGCTGGGATGAGAATGGGGTAGAAGTAGGAAACAGCATAGAGACAACAACCATGGTTCCAGATTACAAGGAGAACTCAAGTTCAAAGATGGGACAACCTTTTAGTTTTCCCAACCTTAACTTAGAATCTCACAATTGTCCTGCTGATGATGCCAAATCAGTGACTGGTTCATGTGGAAATCACATCACTGTTCTTCAAACATCCCCTAATGATTACTTCAAGTCTAGGAGGAGAAACAGTTTGGATGATTTCAGACCTCAATCTTCCTGCAATAGATGTAAACCTGCTGTGATAACTAGTGAATTTGAGAGTACAAGGAACAACAAGAGCTCTAACATTGTTGTTCCCCTCACAGATTCTCATGCATCTTTTCAAACACAACCTAAAAGTAAAGGGATGATTTCATGGTTGTTCCCTCGGTTCAAGAAGAAACACAAGAATGAGAGTTCCCCAAACAGGACAGAATCTGAGGAGGTTTCTCAGGTTCTTAAGGACATGGGGATAATGTCAGTGGAGGCGTTGAAGAGGGAGCTAATTGAGGCCAACGAGAGCAGAGACACCGCGATTGCGGAGGTTTCTGATATGAGATCTTCATTTGGGGAGCTGAAACAGAAGCTGGTGTACTTGGAGAGTTACTGTGAAGAGTTAAAGAAAGCTTTGAGGCAAACAGTGCAGGCAAAAGAATCACCACTTTGTGAGAAGCTTAGCAATCATCCCATTAGAGGAATTCCATTTGATGGGAATGGAGAAAATTTTATGCCTGTGAGTGAGGAGGTAATGGTAGAGGGCTTCTTGCAGATAGTGTCAGAGTCGAGGCTATCAGTGAAGCAATTCTGCAAGACCCTCATAAGCCAGATTGAAGAAACAGATCATGCTTTGATAGACAACTTGAACTTGCTTCTTCAACCTTACAAGCTCTCCCTTGATTCCAAATACTCAAAGGCAGTTCTGTACCATTTTGAAGCTTTCATAAACCAATCTCTCTTCCAAGACTTCGAGAATTGTGTGTTCCAAAAGAATGGCTGCGCAAAATTCTTAGACCCTAGACAAGATCGCCAAGCACAATTCTCCTCATTCGTCGCGCTAAGAAACCTGAGCTGGAATGAGGTGCTGAGAAAGGGTACTAAATATTACAGTGAAGAGTTCAGCAAGTTCTGTGACCAGAAAATGAGTTGCATCATCACTGCACTGAATTGGTTGAGGCCTTGGCATGAGCAGCTACTTCAAGCTTTCTTTGTGGCAGCAAAATGCATATGGTTGCTGCATCTTCTGGCATTTTCTTTCAACCCGCCATTGGGAATTTTGAGGGTGGAAGAGAATAAAAGCTTTGATCCCCACTACATGGAAGATTTGGTCACAGATAGGCAGAGGTCACAGGGTCCAAGCAGGGTTAAGATCATGGTGGTGCCTGGGTTCTATGTTCAGGATAGGGTCTTGAAGTGTAAAGTTATTTGCAGGCACAAATCTGCACCCTAA 1752 0.4401 MAPATATTTTAQIFSNNGNNPEFSRQEIQSAIAKAVELRALHAALTQGTSPNARRFSSPSPASRSASQFSAQDYPVFTPSYEDEPHQSPKSESWDENGVEVGNSIETTTMVPDYKENSSSKMGQPFSFPNLNLESHNCPADDAKSVTGSCGNHITVLQTSPNDYFKSRRRNSLDDFRPQSSCNRCKPAVITSEFESTRNNKSSNIVVPLTDSHASFQTQPKSKGMISWLFPRFKKKHKNESSPNRTESEEVSQVLKDMGIMSVEALKRELIEANESRDTAIAEVSDMRSSFGELKQKLVYLESYCEELKKALRQTVQAKESPLCEKLSNHPIRGIPFDGNGENFMPVSEEVMVEGFLQIVSESRLSVKQFCKTLISQIEETDHALIDNLNLLLQPYKLSLDSKYSKAVLYHFEAFINQSLFQDFENCVFQKNGCAKFLDPRQDRQAQFSSFVALRNLSWNEVLRKGTKYYSEEFSKFCDQKMSCIITALNWLRPWHEQLLQAFFVAAKCIWLLHLLAFSFNPPLGILRVEENKSFDPHYMEDLVTDRQRSQGPSRVKIMVVPGFYVQDRVLKCKVICRHKSAP* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2701 583 Coils Coil 263 283 - -
Lja3g2701 583 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 5 582 IPR042316 -
Lja3g2701 583 MobiDBLite consensus disorder prediction 1 22 - -
Lja3g2701 583 MobiDBLite consensus disorder prediction 45 97 - -
Lja3g2701 583 MobiDBLite consensus disorder prediction 45 75 - -
Lja3g2701 583 PANTHER - 5 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2701 Lja-Chr3 39072011 39074254 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2701 - - lja:Lj0g3v0353689.1 961.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2701 3 39072011 39074254 Lja3g2701 3 39072011 39074254 ECH
Lja3g2701 3 39072011 39074254 Lja3g0627 3 6248752 6251732 PCT