Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0627 ATGGCTGCAACTGCTACTCCTTCACAGGTTTTCAAAGACTACAACAATGATGGTTGCAGCACCAACAATGGCAACCCTGAAATTACAAGGAATGAAATTCAAACCGCCATAGCTAAAGCAGTGGAATTAAGAGCTCTTCATGCTGCTTTAATGCGAGGAAATAGCCCAGCCAGTGCTAAATTCCCATCTCCTTCCCCTGCATCTTGCCCTGTTTCTCAGTTCTCTGCCCAAGATTACCCTGTTTTCACACCTAGCTATGAAGATGACTCAATTTTGGGGTACAGTCAAAATCTCATGAGCCAAACAATATCAGAAAGCTGGGAAGAGAGTGCGCTAGAAGGAGGAAACAGCATAGAAAGCATAGTGCAAGATTACAAGCAGAAATCAAGTTCAAGAAAGGGACTAACTTCAGCTTTTGCCAACCTAGTATCTCACTCATGTCCAGCTGATGACAGCAAATCAGTAACAGGGTCTTGTGCAAATCACATCACTGTTCTTCAAACATCACCTTGTAATGACTACTACAAATCTAGTAGAAGAAACAGTTTGGAGGATTTCAAGTCCATATCCTCCTGCAATAATTGTAACCCTGCCATAATCACTACCGAATTCGAGAGCGCGAGGAACAGCAAGAGCTCCAACACTGTTGTTCTCCCAGTCACTGATTCTCACTCATCTTCACAATCCCAACAGAAAACCAAAGGGCTGATTTCATGGTTGTTGCCTCGGCTGAAGAAGAAGAAGCAAAAGAATGAGAATTTCCCAAACACAGCAGAATCTGAGGATGTTTCTCAGGCTCTCAAAGACTTTGGAATCATGTCAATTGATACATTGAAGAAAGAGCTCAATGAAGCAAATGAGAATAGAGATTTGGCCTTAATGGAAGTTTCTGAGATGAGATCTTCATTGGGGGAGCTTCAACAGAAGCTGGAGTATTTAGAGAGTTACTGTGAAGATCTGAAGAAAGCTTTGAGGCAAGCCATGGAGCCAAAAGATACTCAACTTTATGAACAACTTAATAACATTCCTAAACCATTTGATGGGAATGGAAAAAATTCAATGCCGGTGAGTGAGGAAGCTATGGTAGAGGGATTCTTACAGATAGTATCAGAGTCAAGATTATCAGTGAAGCAATTCTGCAAGATTCTTATAAACAACATTGAAGAAACTGATCATTCTCTAAACTTGCTTCTCCAACCATATAAGCTCTCTCTAAATTCCAAAAATTCAAAGGCAGTGCTGTACCATTTTGAAGCTTTCATAAACCAGTGTTTCTTCCAAGACTTTGAGAACTGTGTGTTCCAAAAGAATGGTTGTGCAAAACTCCTAGACCCACGTGTTTATCGCGAATCACAGTTCTCTTCATTCGTTGCGCTTCGGAAGTTGAGCTGGAACGAGGTGCTGAGAAAGGGAACAAAGTATTACAGTGAAGGGTTCAGCAAGTTCTGTGACCAGAAAATGAGTTGTGTGAACACTAGTCTGAATTGGACTAGGCCTTGGCCAGAACAGCTTCTTCAAGCTTTCTTTGTGGCGGCGAAATGCATGTGGCTGCTGCATTTGCTTGCATTTTCATTCAACCCTCCATTGGGGGTTTTAAGGGTTGAAGAGAATGCAACCTTTGAGAGTCACTACATGGAAGATATGTGTCCTAGATCACAAGGTCCGAAGAGAGTTAAGATCATGGTGATGCCGGGATTTTATGTTCAGGGTAGGGTGTTGAGGTGTAAAGTTCTTTGCAGGTACAAATTCACCGTAGAAAATCACGGTGAAACCAAAATCCTCAACCACAAAAACTAA 1797 0.4179 MAATATPSQVFKDYNNDGCSTNNGNPEITRNEIQTAIAKAVELRALHAALMRGNSPASAKFPSPSPASCPVSQFSAQDYPVFTPSYEDDSILGYSQNLMSQTISESWEESALEGGNSIESIVQDYKQKSSSRKGLTSAFANLVSHSCPADDSKSVTGSCANHITVLQTSPCNDYYKSSRRNSLEDFKSISSCNNCNPAIITTEFESARNSKSSNTVVLPVTDSHSSSQSQQKTKGLISWLLPRLKKKKQKNENFPNTAESEDVSQALKDFGIMSIDTLKKELNEANENRDLALMEVSEMRSSLGELQQKLEYLESYCEDLKKALRQAMEPKDTQLYEQLNNIPKPFDGNGKNSMPVSEEAMVEGFLQIVSESRLSVKQFCKILINNIEETDHSLNLLLQPYKLSLNSKNSKAVLYHFEAFINQCFFQDFENCVFQKNGCAKLLDPRVYRESQFSSFVALRKLSWNEVLRKGTKYYSEGFSKFCDQKMSCVNTSLNWTRPWPEQLLQAFFVAAKCMWLLHLLAFSFNPPLGVLRVEENATFESHYMEDMCPRSQGPKRVKIMVMPGFYVQGRVLRCKVLCRYKFTVENHGETKILNHKN* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0627 598 Coils Coil 275 295 - -
Lja3g0627 598 PANTHER CYCLIN-DEPENDENT KINASE-LIKE PROTEIN 1 584 IPR042316 -
Lja3g0627 598 Coils Coil 303 323 - -
Lja3g0627 598 PANTHER - 1 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0627 Lja-Chr3 6248752 6251732 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0627 - - vra:106756465 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0627 3 6248752 6251732 Lja3g0627 3 6248752 6251732 ECH
Lja3g2701 3 39072011 39074254 Lja3g0627 3 6248752 6251732 PCT