Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2688 ATGCAGAAACTACAACAACCTTTAGATTTTTCTCTCAAGGAAACCTTCCCCAAAATTGGGACAAGGGCAGGGGAAATCACAAGGGACAAGCTTTCTTGCACCTATGACCTTGTTGAGCACATGCAATACCTCTATGTTCATGTGGTCAAAGCCAAGAATTTATCTGTGTATGATGATGTTTGTACTATTGATCCCTATGTTGAAGTCAAGCTTGGAAACTACAAGGGCTCTACCAAGTGGTTTCAGAATGAGTCCAATCCTCAATGGAATCAAATTTTTGCTTTCTCCAAAGATAGTATTCAAGCTTCAGTTCTGGAGCTTGCTGTCAAAGATCATGATGCTGTTGTTGATTATGATGACATGGTAGGGAAAGTAGTGTTGGACCTGAATGAAATACCAAAACACGATAGCCCCTTGGCTCCACAGTGGTACATGATGAAAAATCAGAGAGGTCACAGAGTCAATGGAGAAATAATGCTGGCAATTTGGATGGGAACTCAAGCAGATGAAGCTTTTCCTCAAGCATGGCATTCTGATGCAGCCATGGTTGGACTTGGTCCTAAAGCTGCTGCAAACATAAGATCAAAGGTCTACCTCTCACCTTCCCTTTGGTATCTCAGGGTCAATGTGATTGAGGCTCAAGATTTGGTACCAAAGAACATAACCAGGTACCCAGAACTTTTTGTGAAGGTTGACCTGGGAAACCAGTCTTTAAAAACCAGAATATCTCAAAGAAAAACCATGAATCCTTTTTGGAATGAGGATTTGATGTTTGTTTCTTCTGAGCCATTTGAGGAGCCTTTGTATCTGACTGTACAAGATTGGGTTGGACCAGAAAGTGAGGGTGAGATTGTGGGACGGTGTGTGATTCCTTTGCAGAATGTGCAAAAGAGGTTGGATGACAAGCCTGTGAGCACAAGGTGGTTTAATCTTGAAAAGCATGAGGCTTTTGAAGGGGAAATTACTACTAGATTCTCAAGTAAGATACATTTGAGGGTTTGCTTTGAAGGTGGCTACCATGTGCTTGATGAATCAGCTCATTGCAGCAGTGATCATAGACCAGCTGCAAAACAGCTGTGGAGTCCAAAGATTGGGATTCTTGAAGTGGGGATTATCAGTGCACAGAAGCTAATGCCAATGAAGAGAAGAAATGGTCAAGGAACCACAGATGCATATTGTGTAGCTAAATATGGGAACAAGTGGATCCACACAAGGACAATTGTGGATAGTCTTTCTCCAAAGTGGAATGAGCAATACACATGGGATGTTTACGATCCATGCACTGTTATCACAATAGGGGTCTTTGATAATGCTCATTTACAAGGTGGATCAAGAGATTCAATAATAGGGAAGGTGAGAATTAGGCTGTCTACACTTGAAGCTGGCAAGGTGTACACACACTCTTATCCTCTCTTAGTGCTACAATATTCAGGTTTGAAGAAAATGGGAGAAGTGCAATTAGCTGTGAGGTTCACAAGTTTATCTGTGGTGAACATGCTGTCAATGTATTCACAACCATTGTTGCCAAAAATGCACCACATTCATCCTCTATCTGAAATTCAGAAACATTGGTTGAGGTATCAGGCTATGCAGATTGTGTCAATGAGGTTGAGCCGGGCTGAGCCGCCACTGAGGGAAGAGGTGGTAAAATACATGCTGGATGTGGATTCACACATGTGGCTTGATAATATCTGCAATTGGAAAAGCCCTCTCAAAACCATTCTTATCCACATCGTTTTCATTATACTGGTTCTTCATCCAGGGTTCATTCCTCCCACAATTTGCATGTACCTTGTTTGGATTGGAGTTAGGAACTACAGGTGGAGGCCAAGACACCCTCCTCATATGAACACTCCACTATCTCTTGCTGGTGTCACTCTTGATGAATTAGAAGAAGAGTTTGATACATTCCCAACTTCAAGATCACCACAAGTTGTTAAGAGGAGGTATGATCGTTTAAGAAGCGTTTCAGGGAGGGTCCAGATTTTTCTTGGTGACTTGGCCACTCAAGGAGAAAGGTTCCACAATTTGCTAAGTTGGAGAGACCCTAGAGCTACCACTCTATTTGTCACATTCTGTTCCATTGCTGCTTTTGTTCTGTATGTCACTCCATTCCAAGCTGTGTCCCTTCTTAGTGGATTCTATGTGCTAAGGCATCCCCGATTCCGCCAGAAACTTCCCTCATTGCCATTAAACTTCTTCAAGAGGTTGCCTGCAAGAGTAGATGACATAATGTGA 2238 0.4236 MQKLQQPLDFSLKETFPKIGTRAGEITRDKLSCTYDLVEHMQYLYVHVVKAKNLSVYDDVCTIDPYVEVKLGNYKGSTKWFQNESNPQWNQIFAFSKDSIQASVLELAVKDHDAVVDYDDMVGKVVLDLNEIPKHDSPLAPQWYMMKNQRGHRVNGEIMLAIWMGTQADEAFPQAWHSDAAMVGLGPKAAANIRSKVYLSPSLWYLRVNVIEAQDLVPKNITRYPELFVKVDLGNQSLKTRISQRKTMNPFWNEDLMFVSSEPFEEPLYLTVQDWVGPESEGEIVGRCVIPLQNVQKRLDDKPVSTRWFNLEKHEAFEGEITTRFSSKIHLRVCFEGGYHVLDESAHCSSDHRPAAKQLWSPKIGILEVGIISAQKLMPMKRRNGQGTTDAYCVAKYGNKWIHTRTIVDSLSPKWNEQYTWDVYDPCTVITIGVFDNAHLQGGSRDSIIGKVRIRLSTLEAGKVYTHSYPLLVLQYSGLKKMGEVQLAVRFTSLSVVNMLSMYSQPLLPKMHHIHPLSEIQKHWLRYQAMQIVSMRLSRAEPPLREEVVKYMLDVDSHMWLDNICNWKSPLKTILIHIVFIILVLHPGFIPPTICMYLVWIGVRNYRWRPRHPPHMNTPLSLAGVTLDELEEEFDTFPTSRSPQVVKRRYDRLRSVSGRVQIFLGDLATQGERFHNLLSWRDPRATTLFVTFCSIAAFVLYVTPFQAVSLLSGFYVLRHPRFRQKLPSLPLNFFKRLPARVDDIM* 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2688 745 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 560 - -
Lja3g2688 745 ProSiteProfiles C2 domain profile. 348 469 IPR000008 -
Lja3g2688 745 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 560 744 - -
Lja3g2688 745 Pfam C2 domain 204 311 IPR000008 -
Lja3g2688 745 Pfam C2 domain 43 144 IPR000008 -
Lja3g2688 745 Pfam C2 domain 365 471 IPR000008 -
Lja3g2688 745 CDD C2B_MCTP_PRT_plant 43 166 - -
Lja3g2688 745 Pfam Plant phosphoribosyltransferase C-terminal 592 745 IPR013583 -
Lja3g2688 745 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 560 - -
Lja3g2688 745 CDD C2C_MCTP_PRT_plant 205 354 - -
Lja3g2688 745 CDD C2D_MCTP_PRT_plant 366 488 - -
Lja3g2688 745 ProSiteProfiles C2 domain profile. 25 144 IPR000008 -
Lja3g2688 745 Gene3D C2 domain 34 165 IPR035892 -
Lja3g2688 745 Gene3D C2 domain 189 335 IPR035892 -
Lja3g2688 745 Gene3D C2 domain 349 495 IPR035892 -
Lja3g2688 745 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 204 356 IPR035892 -
Lja3g2688 745 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 43 180 IPR035892 -
Lja3g2688 745 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 365 493 IPR035892 -
Lja3g2688 745 SMART C2_3c 366 468 IPR000008 -
Lja3g2688 745 SMART C2_3c 43 141 IPR000008 -
Lja3g2688 745 SMART C2_3c 205 304 IPR000008 -
Lja3g2688 745 ProSiteProfiles C2 domain profile. 187 309 IPR000008 -
Lja3g2688 745 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 560 744 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2688 Lja-Chr3 38741104 38743416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2688 1 745 Lipid Metabolism Gene Families AT5G12970 66.237 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2688 - - gmx:100807941 1082.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2688 3 38741104 38743416 Lja3g2688 3 38741104 38743416 ECH
Lja3g0622 3 6205991 6209282 Lja3g2688 3 38741104 38743416 ECH
Lja3g2688 3 38741104 38743416 Lja3g0622 3 6205991 6209282 PCT