Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2120 ATGAGCTATGCACATTATCAAACGGGCTCTGGTAGTAGAACTGCTAGAAGAACTTTGGAGTTTGGGAAGACCCATGTGGTGAGGCCCAAAGGAAAACACCAAGCTACTATAGTTTGGCTGCATGGCCTTGGTGATAATGGTTTGAGTTCATATCAGCTCCTGGAATCTCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTATCCGCCCTGTGGCAATACTTGGTGGTTTTTGTTGCACTGCATGGTTTGATATGGGAGAGCTTTCAGAAGATGGTCCAGATGATTGGGAGGGCTTAGATGCCTCAGCAGCACATATTGCCAACTTGCTGTCAACAGAACCACCTGATGTGAAAGTTGGAATTGGAGGCTTCAGTATGGGTGCTGCAACAGCTCTATACTCTGCAACTTGTTTTGCCATGGGAAGGTGTGGAAATGGCATCCCCTACCATATCAACTTAAGAGCAGTTATTGGACTAAGTGGCTGGCTTCCAGGATCAAGGAGCTTGAGGAACAAGATTGAAGCGTCAAACGAAGCAAGGCGGCGAGCAGCTTCATTACCCATTTTGTTGAGTCATGGAATCAGTGATGATGTAGTCCTCTACAAATATGGAGAGAAATCAGCCCAATCCTTAAGTTCAGCAGGGTTCCAATACATTACATTCAAATCCTATGATGGCCTTGGTCATTATACGGTTCCAAGAGAGATGGATGAGGTCTCCAATTGGCTGCGCACAAGTCTGGGGCTTGAGGGGGCTTGA 768 0.4622 MSYAHYQTGSGSRTARRTLEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSYQLLESLPLPNIKWICPTAPIRPVAILGGFCCTAWFDMGELSEDGPDDWEGLDASAAHIANLLSTEPPDVKVGIGGFSMGAATALYSATCFAMGRCGNGIPYHINLRAVIGLSGWLPGSRSLRNKIEASNEARRRAASLPILLSHGISDDVVLYKYGEKSAQSLSSAGFQYITFKSYDGLGHYTVPREMDEVSNWLRTSLGLEGA* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2120 255 Gene3D alpha/beta hydrolase 15 251 IPR029058 -
Lja3g2120 255 Pfam Phospholipase/Carboxylesterase 24 249 IPR003140 GO:0016787
Lja3g2120 255 SUPERFAMILY alpha/beta-Hydrolases 25 248 IPR029058 -
Lja3g2120 255 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
Lja3g2120 255 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2120 Lja-Chr3 24828290 24831379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2120 6 255 Acyl Lipid Metabolism Gene Families AT3G15650 75.600 2.72e-127 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2120 K06130 - gmx:100782153 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2120 3 24828290 24831379 Lja3g5168 3 94031247 94036082 ECH
Lja3g2120 3 24828290 24831379 Lja3g2120 3 24828290 24831379 ECH
Lja3g5168 3 94031247 94036082 Lja3g2120 3 24828290 24831379 PCT