Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2093 ATGGGTAGCACGGTTGAAGAACAAGAAGATGTTGAGTACGACAGTGATCCGGAAGAGGCAAAGAGATCGCTGTCAATGCGGAGGCGTGAGGCTAGTGATGATGAAGAAGGCGAAGGCAGAGATAAGAGGGAAGAACAAGAAGAAGAAGAAGATCGTCGTGTTGGGATTCTTTCTGATGATGATTCTGATGGCGAGGGCGGTGTTGCTGACTATGATGACGGTGGTGATGAAATTGAAGAAGAAGAAGAAGAATTAGATGAAGAGGAGGAGGAGGTGGTGGTGTTTGATGAAGTTGAACAAGAGGTGTATGAGGAGCTGGGTGCAGCAAGTGGGGTTGAGGGTTCAGTGATTGTGGCTAAGGAATCTGATGGTGATATTGGACCCCCTTTGGAAGATTCTGCTGAGGTTGATACAGAGGAGAAAAAGGAGAATGAACCATTTGCTGTGCCCACTGCTGGAGCTTTTTACATGCACGATGACCGTTTCAGGGACAATTCCGGTGCCGGCAACAGGCGGGTACATGGTGGTGGAAAGAGACTGTGGGAGTCCAAAGATGACAGGAAATGGGGACATGATAAATTTGAGGAAATTACTTTCCAGGAAAGGCACTACCAAGAGAGGAGGGGAGCTTCTAATTATCGAGGAGGCCGTGGTAATAACCGAGGCAGTGATCGTGGAGGACATATTCGAGGAAACAGGAGGGGATATAATGACAGTAGCCAAAATCAGGTGCCTAAGGTTGTTGTGAAAGGGAGAGGGCCCCGAAGGTACGATCCTACCAATAGAAGCAGTGGTCCAGCTCCCCAAGTTCATAATAAACAATCTGGGAAGTCTTTTGAGAAAACTGCACCTGCTAGATCAGAGAGAACTTCAACATCCGCTTCCAATGCAGAATCTAACCCTGTGCCTGCTAGGAAACAAGTGTCGTCAGCTTCAAATTTGAATTATGCATCCCCGCCATTTTACCCATCAGGCTCTTCCAACAAAGAGATCAATTTGGTACAAAATAAAAATGCACAAGTTGGAAGCAATAGCAAGAACAATGCATTGCTTCAGGGAAAGAATCTTGTTGATTCCATCAACATAGACAAGGTGTACATTGATAAGTCCACCAGGCCATCTGTTGGAAAGCCTTCGAACAATGTGCATATAACACCACCTGGATCTTCTGGAGTCAATGCATTCCATGCTTCTCTTCCCATGGCTGCTGGGACTGGGAGGGGTGTAGCAATCCCCATACAGATGAACTATCAGCCTGCACCCTCACATAATCACGTAAATAAAGTTTCTCCAGGGCAACTCCAGTCTGTTCAGAGAAGTTATGCACCAGGAAGGTCCTCAACATCTGTGCAAGCTACTGCCCAACAGTTGGGCCATCGACCTAGTAGTAGGTCTCAATCTTCATCTCCCCCGAAAACATCTGCGTCATTTAATTCACTTGATTCCGTAGATATGGACTCAGCATCAGAATCAGGTAAAACAAAAGGGGCTATGATTGGGAAGGGAAAGGGAGGTTCCCAGGGTACTGGACAGGGTTCTTTTGTTTATGGTGGGGCACAGGTAATGGGGGCTGCTGGAAATGGGGGTGTTAGTCATAGAGATCCAAACTTCCCAGCCACTCCTACCTTCTTGCCAGTGATGCAATTCGGGGGCCAGCATCCTGGTGGTATGGGAGTTCCTGCTGTTGGCATGGCATTCCCTGGATATGTTGCTGGTTCAGGAAAATCTGAAATGACATGGTTACCAGTCTTGGCTGGCGCTGCAGGAGCTTTGGGGGCTTCATACCCATACCTTGCTGTTGATGGTGCTTACACTCGACAATCTGGACCGACCTCTGCAATGGGTAATTCAAGCAAGGAACATAATGATGTTAATAAAGCTAACAATGAATTGAAGCCACCACAGAAATCTGAGCTTGTAAGTGATGAGTATGGACAACGGCAGAATAAGCCTCGAAGATACTCAGAGATGAACTTTGGTCAGTAA 1986 0.4698 MGSTVEEQEDVEYDSDPEEAKRSLSMRRREASDDEEGEGRDKREEQEEEEDRRVGILSDDDSDGEGGVADYDDGGDEIEEEEEELDEEEEEVVVFDEVEQEVYEELGAASGVEGSVIVAKESDGDIGPPLEDSAEVDTEEKKENEPFAVPTAGAFYMHDDRFRDNSGAGNRRVHGGGKRLWESKDDRKWGHDKFEEITFQERHYQERRGASNYRGGRGNNRGSDRGGHIRGNRRGYNDSSQNQVPKVVVKGRGPRRYDPTNRSSGPAPQVHNKQSGKSFEKTAPARSERTSTSASNAESNPVPARKQVSSASNLNYASPPFYPSGSSNKEINLVQNKNAQVGSNSKNNALLQGKNLVDSINIDKVYIDKSTRPSVGKPSNNVHITPPGSSGVNAFHASLPMAAGTGRGVAIPIQMNYQPAPSHNHVNKVSPGQLQSVQRSYAPGRSSTSVQATAQQLGHRPSSRSQSSSPPKTSASFNSLDSVDMDSASESGKTKGAMIGKGKGGSQGTGQGSFVYGGAQVMGAAGNGGVSHRDPNFPATPTFLPVMQFGGQHPGGMGVPAVGMAFPGYVAGSGKSEMTWLPVLAGAAGALGASYPYLAVDGAYTRQSGPTSAMGNSSKEHNDVNKANNELKPPQKSELVSDEYGQRQNKPRRYSEMNFGQ* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2093 661 MobiDBLite consensus disorder prediction 15 60 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 607 635 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 262 310 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 373 389 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 1 92 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 370 389 - -
Lja3g2093 661 Coils Coil 71 98 - -
Lja3g2093 661 PANTHER PROTEIN MLN51 HOMOLOG 7 661 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 63 92 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 121 146 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 160 187 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 421 489 - -
Lja3g2093 661 MobiDBLite consensus disorder prediction 200 310 - -
Lja3g2093 661 Pfam CASC3/Barentsz eIF4AIII binding 133 215 IPR018545 GO:0003729|GO:0006397|GO:0035145
Lja3g2093 661 MobiDBLite consensus disorder prediction 607 661 - -
Lja3g2093 661 PANTHER PROTEIN MLN51 HOMOLOG 7 661 IPR044796 GO:0003729|GO:0006397|GO:0035145
Lja3g2093 661 SMART Btz_2 117 220 IPR018545 GO:0003729|GO:0006397|GO:0035145
Lja3g2093 661 MobiDBLite consensus disorder prediction 421 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2093 Lja-Chr3 24392447 24396068 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2093 - - mtr:MTR_4g011920 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2093 3 24392447 24396068 Lja3g2093 3 24392447 24396068 ECH
Lja3g5142 3 93756251 93761398 Lja3g2093 3 24392447 24396068 PCT