Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2007 ATGGACAGAAACCACTCCCACAGGCACCTTGCTGCCATGAAACAATCTCTCTTTGATCAGGGATTGCTGGATGAACAATTTATTCAACTGGAAGAACTGCAGGATGATGCTAATCCTAACTTTGTTGAGGAAATTGTGACTCTTTACTACCGCGATTCATCGCGCCTTATCTCAAACATAGATCAGGCACTCAAAGAGAGGAACTCAATGGATTTCAACAAGCTGGACACACTTATGCATCAGTTCAAAGGAAGCAGCTCAAGCATCGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTATTTAGAGAATACTGCATGGCAGGAAATGCAGAAGGATGCATAAGGAGCTTCCAACAACTAAAGAAAGAGTATGCTGCACTGAAAAAGAAACTTGAAGCTTATTTTCAGTTTGCTAGGCAATCTGGGCCCTCTGAGACAGCGTGTCGCCCCAAATGA 456 0.4364 MDRNHSHRHLAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLISNIDQALKERNSMDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCMAGNAEGCIRSFQQLKKEYAALKKKLEAYFQFARQSGPSETACRPK* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2007 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
Lja3g2007 151 PANTHER - 3 147 IPR045871 GO:0000160|GO:0009927|GO:0043424
Lja3g2007 151 CDD HPT 42 132 IPR008207 GO:0000160
Lja3g2007 151 Pfam Hpt domain 44 128 IPR008207 GO:0000160
Lja3g2007 151 PANTHER HISTIDINE-CONTAINING PHOSPHOTRANSFER PROTEIN 4 3 147 - -
Lja3g2007 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Lja3g2007 151 Gene3D HPT domain 2 145 IPR036641 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2007 Lja-Chr3 23228188 23229691 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2007 K14490 - gmx:100798055 261.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2007 3 23228188 23229691 Lja3g5076 3 93085763 93087287 ECH
Lja3g2007 3 23228188 23229691 Lja3g2007 3 23228188 23229691 ECH
Lja3g5076 3 93085763 93087287 Lja3g2007 3 23228188 23229691 PCT