Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1955 ATGTCTAACACTAACTGTGCCACACTACTTCACACTTTCACATCCAAAAAGCACAACACATTCTTCACCAACATCTACCTCCTCACCTTTGCCACTATCCTCTGCACCCTCTTCTACCTCATCGGCCTCTGGCACCACTCCCCCACCACCGCCGCCATCGCCATCACCTCCATCCCCTCCCTCTGCTTACACCACGACAACACTTCCATCCTCACCACCGCCCCCTCATCCACCAAACTCGACTTCACCGCTCACCACCACCTCCCGGACCCACCTCCCACGGCGGCACGTGAGATCCACCTCCCTCCCTGCGACCCCTCCCTCTCCGAGCACACTCCCTGCGAGGACCTAAAGAGGTCACTGAAGTTCCCCCGGAGCAGGCTTGTCTTCCGGGAGAGACACTGCCCGGCGCAGGAGGAGGTTCTCCGATGCCGGATTCCTGCGCCTTATGGTTACCGGTTGCCGCCGCGGTGGCCGGCGAGTCGGGACTCGGCGTGGTACGCGAACGTGCCGCACAAGGAGCTGACTGTGGAGAAGAAAAAGCAGAACTGGGTCCACTTCGAAGGGGAACGGTTCAGATTTCCAGGCGGTGGGACCATGTTTCCACGTGGCGCAAGCGCATACATTGATGACATCGGGAAACTGATCAATCTCAGGGATGGATCTATCAGAACCGCCATTGACACCGGTTGTGGGGTTGCAAGTTGGGGAGCTTATCTTCTGTCCCGTGACATTTTAGCCGTTTCTTTTGCACCAAGAGATAGTCATGAAGCCCAGGTTCAATTTGCTCTTGAACGAGGAGTACCTGCATTGATTGGAATTATTGCATCAATCAGGCTTCCTTATCCTTCAAGAGCCTTTGACATGGCTCACTGCTCACGTTGCCTCATTCCCTGGGGCCAGTATGATGGTATTTACTTGACTGAAGTTGATCGAGTACTACGACCCGGGGGATACTGGATTCTATCAGGGCCGCCGATAAACTGGCAGAAACACTGGAAGGGCTGGGAAAGGACTGCTGAGAGTCTCAAAGAAGAACAGGATGCAATTGAGAATGTGGCAAAAAGTCTATGCTGGAAAAAACTAAAACAAAAGGGTGACCTTGCAATATGGCAGAAGCCCACCAATCATGCACATTGCAAACTCAAACAGAAGATCTTCAAGAATAAACCCTACTGCGAGGCACAGGATCCAGACATGGCATGGTACACCAAACTGGATACCTGCTTGACTCCACTGCCAGAGGTAAACGACATCAAAGAAGTTGCGGGTGGGGAATTGACAAAGTGGCCTGAGAGACTAACTTCAATTCCCCCAAGGATTCGTAGTGAAAGTTTGAAAGGAATAAATGCTGAGATGTTCAAAGAAGATACTCAGTTATGGAAAAAGAGAGTGGCATACTACAAAACCCAGGACCCTCAATTAGCAGAGCGCGGGAGATATCGAAATCTGCTTGATATGAATTCTTACTTGGGAGGCTTTGCAGCTGCACTGGTTGATGATCCAGTGTGGGTCATGAACATTGTCCCGGTTGAGGCTGAGATTAACACCCTTGGCGTCATATATGAACGTGGACTGATTGGAACCTATCAGAACTGGTGTGAAGCCATGTCCACTTATCCTCGAACTTATGACTTCATACATGGTGATTCAGTTTTTAGCCTCTATGAAAACAGATGTAGCATGGAGAACATTCTTCTAGAGATGGACCGGATTTTGCGGATGCAAGGTAGCGTCATTTTGCGCGATGATGTGGATGTGTTGATGAAGGTGAAGAGCATTACAGATGAAATGCAATGGGATGCCAAGATTATAAATCATGAAGAGGGACCTTTCCAGAGAGAAAAGATACTAGTAGCAGTCAAACAGTACTGGACAGCCCCACCACCAGAACAAAACCCAAACAGCAAGCGCTAG 1917 0.5018 MSNTNCATLLHTFTSKKHNTFFTNIYLLTFATILCTLFYLIGLWHHSPTTAAIAITSIPSLCLHHDNTSILTTAPSSTKLDFTAHHHLPDPPPTAAREIHLPPCDPSLSEHTPCEDLKRSLKFPRSRLVFRERHCPAQEEVLRCRIPAPYGYRLPPRWPASRDSAWYANVPHKELTVEKKKQNWVHFEGERFRFPGGGTMFPRGASAYIDDIGKLINLRDGSIRTAIDTGCGVASWGAYLLSRDILAVSFAPRDSHEAQVQFALERGVPALIGIIASIRLPYPSRAFDMAHCSRCLIPWGQYDGIYLTEVDRVLRPGGYWILSGPPINWQKHWKGWERTAESLKEEQDAIENVAKSLCWKKLKQKGDLAIWQKPTNHAHCKLKQKIFKNKPYCEAQDPDMAWYTKLDTCLTPLPEVNDIKEVAGGELTKWPERLTSIPPRIRSESLKGINAEMFKEDTQLWKKRVAYYKTQDPQLAERGRYRNLLDMNSYLGGFAAALVDDPVWVMNIVPVEAEINTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFSLYENRCSMENILLEMDRILRMQGSVILRDDVDVLMKVKSITDEMQWDAKIINHEEGPFQREKILVAVKQYWTAPPPEQNPNSKR* 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1955 638 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 110 622 IPR004159 GO:0008168
Lja3g1955 638 Gene3D Vaccinia Virus protein VP39 174 379 IPR029063 -
Lja3g1955 638 PANTHER GENERIC METHYLTRANSFERASE 13 631 - -
Lja3g1955 638 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 631 IPR004159 GO:0008168
Lja3g1955 638 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 132 367 IPR029063 -
Lja3g1955 638 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 475 589 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1955 Lja-Chr3 22465731 22472059 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1955 - - gmx:100813493 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1955 3 22465731 22472059 Lja3g1955 3 22465731 22472059 ECH
Lja3g1955 3 22465731 22472059 Lja1g3152 1 38534330 38539918 ECH
Lja1g3152 1 38534330 38539918 Lja3g1955 3 22465731 22472059 PCT