Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3152 ATGGCAAAACCCAACAAGCCTCTCACTAGGCTCTACTACATCACCTTCACCATCATTCTCTGCACCCTCTTCTACCTCATCGGCCTCTGGCAACACCCAACAAACACCGCCACCGCCGCCGTCGGCAGCCACTTCTCCGCCGTCAACTGCCCCCACCTCAATTCCACCTCCACCACCACTTCCTCCGACACCCTCGATTTCTCCGCCCGCCACTACAACCCCGACCCGCCGCCCACGGAGGCGGGTGTCACCCACGCGCCGCCGTGTGACGTGTCGCTATCGGAGCACACCCCATGCGAGGACGTGCAGAGGTCGCTGAGGTTCCCCCGTGACAGACTGATTTACCGGGAGCGGCATTGTCCGGCGCCGGAGGATGCGCTCCGGTGTAGGATTCCGGCGCCGTTTGGGTACCGGGTGCCGCCGCGGTGGCCGGAGAGTCGTGACTGGGCGTGGTACGCGAATGTGCCGCACAAGGAGCTTACTGTGGAGAAGAAGAATCAGAACTGGGTCCGGTTCGAAGGTGAACGGTTCAGATTCCCCGGTGGTGGGACCATGTTTCCACGTGGCGCAAGCGCGTACATTGATGACATCGGAAAGCTCATCAACCTTAAAGATGGGTCCATCAGAACCGCCATTGATACTGGTTGTGGGGTAGCAAGTTGGGGAGCTTATTTGATGTCACGTGATATATTAGCAGTGTCATTTGCACCAAGGGATACCCATGAAGCTCAGGTTCAATTTGCTCTTGAACGTGGAGTTCCTGCATTGATTGGAGTTCTTGCTTCAATTAGGCTTCCATACCCTTCAAGAGCCTTTGACATGGCTCACTGCTCACGTTGCCTCATTCCCTGGGGCCAATATGAGGGGGTTTACTTGACTGAAGTTGATAGAGTGTTACGCCCCGGCGGGTATTGGATTCTATCAGGGCCACCAATAAACTGGGAGAGCCATTGGAAAGGCTGGGAGAGGACCAGAGAGAGTCTCAAAGATGAACAGGATGAAATTGAGAGAGTGGCAAAGAGTCTGTGCTGGAAGAAGTTGATACAGAAGGGTGATCTTGCAATATGGCAGAAACCCACCAATCATATACATTGCAAAATAACTAGAAAGGTCTTCAAGAATAGACCCTTTTGTGAGACACAGGATCCAGACACAGCTTGGTACACCAAAATAGATACCTGCTTGACACCAATGCCTGGGGTGAATGACGTAAGAGATGTTAGTGGTGGAGAATTGTCTAAATGGCCTGAGAGGCTAACATCAATTCCTCCAAGGATTAGCAGTGGAAGTTTGAATGGAATTACAGCTGATAAGTTCAGAGAACACAACCAGTTGTGGAAGAAGAGAGTGGCATACTACAAGAGCCTGGACTATCAGCTCGCTGAGCGCGGGAGATACCGCAATCTGCTTGACATGAATGCTTACTTGGGAGGCTTTGCAGCTGCATTGATTGATGATCCAGTGTGGGTCATGAATGTTGTCCCTGTTGAGGCTGAGATCAACACACTTGGTGTCATATATGAACGTGGATTGATTGGAACCTATCAGAACTGGTGTGAAGCCATGTCCACCTACCCAAGAACCTATGACTTCATACATGGTGATTCAGTTTTCACCCTCTACCAGAACAGATGCAACATAGAGGACATACTTCTTGAGATGGACCGGATTTTGCGGCCACAAGGCAGTGTGATCTTGCGCGATGATGTGGATGTGTTGCTTAAGGTGAAGAGGTTTGCTGATACAATGCAATGGGATACCAGAATTGCAGACCATGAAAAGGGTCCTCACCAAAGAGAGAAAATACTTGTAGCAGTGAAACAGTACTGGACAGCCCCACTACCTGACCAAAGCCAACAAAGGAAGTTGTAA 1872 0.5107 MAKPNKPLTRLYYITFTIILCTLFYLIGLWQHPTNTATAAVGSHFSAVNCPHLNSTSTTTSSDTLDFSARHYNPDPPPTEAGVTHAPPCDVSLSEHTPCEDVQRSLRFPRDRLIYRERHCPAPEDALRCRIPAPFGYRVPPRWPESRDWAWYANVPHKELTVEKKNQNWVRFEGERFRFPGGGTMFPRGASAYIDDIGKLINLKDGSIRTAIDTGCGVASWGAYLMSRDILAVSFAPRDTHEAQVQFALERGVPALIGVLASIRLPYPSRAFDMAHCSRCLIPWGQYEGVYLTEVDRVLRPGGYWILSGPPINWESHWKGWERTRESLKDEQDEIERVAKSLCWKKLIQKGDLAIWQKPTNHIHCKITRKVFKNRPFCETQDPDTAWYTKIDTCLTPMPGVNDVRDVSGGELSKWPERLTSIPPRISSGSLNGITADKFREHNQLWKKRVAYYKSLDYQLAERGRYRNLLDMNAYLGGFAAALIDDPVWVMNVVPVEAEINTLGVIYERGLIGTYQNWCEAMSTYPRTYDFIHGDSVFTLYQNRCNIEDILLEMDRILRPQGSVILRDDVDVLLKVKRFADTMQWDTRIADHEKGPHQREKILVAVKQYWTAPLPDQSQQRKL* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3152 623 PANTHER GENERIC METHYLTRANSFERASE 3 616 - -
Lja1g3152 623 MobiDBLite consensus disorder prediction 61 84 - -
Lja1g3152 623 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 3 616 IPR004159 GO:0008168
Lja1g3152 623 Gene3D Vaccinia Virus protein VP39 158 365 IPR029063 -
Lja1g3152 623 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 95 607 IPR004159 GO:0008168
Lja1g3152 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 362 IPR029063 -
Lja1g3152 623 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 436 582 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3152 Lja-Chr1 38534330 38539918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3152 - - gmx:100794369 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3152 1 38534330 38539918 Lja1g3152 1 38534330 38539918 ECH
Lja3g1955 3 22465731 22472059 Lja1g3152 1 38534330 38539918 ECH
Lja1g3152 1 38534330 38539918 Lja3g1955 3 22465731 22472059 PCT