Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1940 ATGTCTTCTTTTACTGCTCTTCATAGCCTACATGGTTCTCTTCTTCGATCCCAGTTCCTAGGCCAAGACAGCCTCACTCATCTCAACCCTCGCAGCAAGATTCACATCAAACCATCCCACAAATTTGTACAACCATGTGCCAAATTCAACTTGGTGCAAATCATGGGAGGCAGAGGACTCTGCAACGGAGAAGAAGGCCTCGAACAAGAGTTGAAGAGGCAAGTTGGTGCTGATGAGAAGCCACTTCCACCAGCAGCAAGTGACAAAGAGCAAGAAGACTCAGGTGGCTCAACAACACAGGTTGCAGAAGATGGTTTTGAGAAGGAACTGATGGGGTTAACTGGGGGGTTTCCAGGGGGTGAGAAAGGATTGAGAAAATTCATTGAGGAAAATCCACCACCTAAACCAGGAGCAGGAAGCAAAAGCTTGAACCTTACATCCTCAGTGAAGCCAAAAGCACCAGAACTTCCTATGTTGCTTCCAGGAATGATTGCCATTGTGAAGAACCCAAACAACCCTTTTTACATGTACTGTGGTATAGTGCAAAGAATCACTGATGGCAAAGCAGGTGTTCTCTTTGAAGGTGGGAACTGGGATAAGTTGATCACGTTCAGGTTGGATGAACTGGAGCGCAGAGAAAAAGGGCCTCCCATGAAGAATCCTAAGTCCTGTGTGCTTGAGCCATTGCTTGAGAAGAAGTCATAG 705 0.4652 MSSFTALHSLHGSLLRSQFLGQDSLTHLNPRSKIHIKPSHKFVQPCAKFNLVQIMGGRGLCNGEEGLEQELKRQVGADEKPLPPAASDKEQEDSGGSTTQVAEDGFEKELMGLTGGFPGGEKGLRKFIEENPPPKPGAGSKSLNLTSSVKPKAPELPMLLPGMIAIVKNPNNPFYMYCGIVQRITDGKAGVLFEGGNWDKLITFRLDELERREKGPPMKNPKSCVLEPLLEKKS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1940 234 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 233 IPR021659 GO:0009767
Lja3g1940 234 MobiDBLite consensus disorder prediction 121 146 - -
Lja3g1940 234 Pfam NAD(P)H dehydrogenase subunit S 159 210 IPR021659 GO:0009767
Lja3g1940 234 MobiDBLite consensus disorder prediction 212 234 - -
Lja3g1940 234 MobiDBLite consensus disorder prediction 75 100 - -
Lja3g1940 234 Gene3D - 152 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1940 Lja-Chr3 22317364 22318569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1940 K00345 - gmx:100527145 363.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3123 1 38142393 38145243 Lja3g1940 3 22317364 22318569 PCT