Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3123 ATGGCTTCTTTTGCTACTCTCCATGGCCTGCATGGTTCTCTTCTGAGATCCCAGTTCCTAGGCCAAGATTACCACTGTACTCATCATCACTTTCCTCTGAAACAACCCTCCACATCACATCAAAGAAAACAAACTTCTGAGTTACATGCCAAGTTCAACATAATGGAAATCATGGGAGGCAGAGGACTCTGCAATGGAGAAAAAGGCCTTCAACAAGAGCTGGAAAGGCAAGTTGTTGTTGATGACCACCCGCTGCCGCCGCCGCCAGAATCAAGTGGTGAAGAGCAAGAACAGCTGAATAGTGATGGCAGTGTTGTTGCAGTTGCAGAAGATGCTTTTGAGAAAGAAATGATGGGTTTGACTGGGGGGTTCCCTGGTGGTGAGAAAGGGTTGAAGAAGTTCATTGAAGAAAATCCACCTCTCCCTAAATAG 432 0.463 MASFATLHGLHGSLLRSQFLGQDYHCTHHHFPLKQPSTSHQRKQTSELHAKFNIMEIMGGRGLCNGEKGLQQELERQVVVDDHPLPPPPESSGEEQEQLNSDGSVVAVAEDAFEKEMMGLTGGFPGGEKGLKKFIEENPPLPK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3123 143 PANTHER NADH DEHYDROGENASE-LIKE COMPLEX, SUBUNIT S-RELATED 1 140 - -
Lja1g3123 143 MobiDBLite consensus disorder prediction 118 143 - -
Lja1g3123 143 MobiDBLite consensus disorder prediction 80 105 - -
Lja1g3123 143 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT S, CHLOROPLASTIC 1 140 IPR021659 GO:0009767
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3123 Lja-Chr1 38142393 38145243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3123 K00345 - lja:Lj1g3v2627410.1 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3123 1 38142393 38145243 Lja3g1940 3 22317364 22318569 PCT