Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1892 ATGTCAAAGTCCAAACCTTATGCTGATCTTCCTATTTTGGACATTTCACAGCCAATACAGCCATCTTCTCTAACCTCTCTCTCTAGAGCCTGCAAAGACTGGGGATTTTTCCACATAATCAACCATGAAATCTCCAAAGATCTTTGCAGCCAGCTCCATTCATTATCCAAATACATCTTCAACCTCCCTTCTGATACTAAGCTTAAGCTTGGTCCTTTCTCTTCTATAAAATCTTACACCCCTCACTTCATTGCTTCTCCATTCTTTGAAAGCCTCAGAATTAATGGACCGAACTTCTATGTTTCTGCAAAGAGCTCTGAAGATATCCTGTTTCAGGAACAGAGTTCAAAATTCAGTGAGACACTTGAGGAATATTGCAGTAAGATGGCAGGTTTGTCAGAAAATATTCTGAAGCTTGTGTTGATGAGCTTAGGGGATGGCTTTGAGAAGTTGTTCTATGATTCTGAATTCAAGAAGTGCCATGGTTACTTGAGGATAAACAACTACTCTGCTCTAGAAGCAGAAAAAAGTGTGGAAGATCAAGTTGAGGGTCTTGGGATGCACACTGATATGAGCTGCATTACTATCCTATATCAAGATGAAATTGGAGGGCTTCAAGTTAGATCACATGATGATGAAGGAAAGTGGATTGACATAACCCCATCTGAAGGGTCCCTTGTGGTGAACATAGGAGACATGATGCAAGCTTGGAGCAATGACAAATTAAGATCCTCTGAGCACAGAGTTGTTTTGAAGCAACCTATGAATAGATTTTCATTGGCTTTCTTTTGGTGCTTTGAGGATGAGAAGGTAGTTTTGGCACCAGAAGAAGTGGTTGGAGAAGGAAACAAGAGGGTGTATAGCCCTTTTGTGTGCTCAGAGTATTTGAAATTCAGAGAGAACAATGAAAGAGGAAGATTTGAGAAGGTGGGTTACACAGTCAGGGATTTTGCTGGGATCAAGATTTGA 969 0.4056 MSKSKPYADLPILDISQPIQPSSLTSLSRACKDWGFFHIINHEISKDLCSQLHSLSKYIFNLPSDTKLKLGPFSSIKSYTPHFIASPFFESLRINGPNFYVSAKSSEDILFQEQSSKFSETLEEYCSKMAGLSENILKLVLMSLGDGFEKLFYDSEFKKCHGYLRINNYSALEAEKSVEDQVEGLGMHTDMSCITILYQDEIGGLQVRSHDDEGKWIDITPSEGSLVVNIGDMMQAWSNDKLRSSEHRVVLKQPMNRFSLAFFWCFEDEKVVLAPEEVVGEGNKRVYSPFVCSEYLKFRENNERGRFEKVGYTVRDFAGIKI* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1892 322 Gene3D - 1 305 IPR027443 -
Lja3g1892 322 SUPERFAMILY Clavaminate synthase-like 5 302 - -
Lja3g1892 322 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 78 IPR026992 -
Lja3g1892 322 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 160 267 IPR005123 -
Lja3g1892 322 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 2 316 - -
Lja3g1892 322 Pfam 2OG-Fe(II) oxygenase superfamily 165 263 IPR044861 -
Lja3g1892 322 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 2 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1892 Lja-Chr3 21697004 21698263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1892 6 295 Glycosyltransferase AT5G59530 27.152 3.96e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1892 - - gmx:100782766 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3092 1 37624909 37626222 Lja3g1892 3 21697004 21698263 PCT