Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1864 ATGCCTGAAGAAATGGTGAAAAGGTCACCTGCTCAAGAAAAATATGGCAGGATTCAATTTGCAATAAGGTTAGTGGCGGTGCTAGTGTTTCTGGGATGGATTCTACTATGGATAATGGCGCCCACAAACACTTACGCAAAAAAATGGAGTCCTCAAATTGTAAAAAAGACTATTTCTACATATTTTGGAATACAAGGTTCAAATATTCTGACTTTCACTTTCCCAATCTTGTTCATAGCTGTTTTGGGATGTGTCTACCTCCAAATAGCCACAAAAAGCACCATCATCAGCAGCAGCAATGACCTCTCAACCATGTGGAAGAGTCCAGTGCTTGTAAAAGGCCCTCTTGGCATTGTTTCTAGCACAGAACTAGCATTCTTGCTCATGTTCATTGCATTATTAATTTGGTCTTTTACAACTTATATATACAATAGCTTTCCACAAATCACTCCGAAATCAGCAGCAGCATTTGGCATGAACGTATGGGAAGCGAGACTAGATTATGCAGCAGCGTGGTTGGGTAGGACTGGGACCGTATGCTTGGCATTCCTGTTTTTTCCGGTGGCGCGTGGCTCGACGGTCCTTCCACTGCTTGGCCTGACCTCGGAGAGTTGCATCAAGTACCATATTTGGCTTGGACACATAGTCATGACAATCTTCACTTCTCACGGCATTTGTTACATCATCCTTTGGGCAGCCACATCCCAAATTTCTCAGATGCTGAAATGGAACAAAGTTGGGATATCAATAGTGGCAGGAGAGATAGCTTTGCTTGCTGGTTTATTCCTGTGGGTTACAACCATTCCCCGCATAAGGCGAAAAGTTTTTGAGCTCTTCTTCTACGCTCATTACATATACATCATCTTCATCATTTTCTTCGTCTTTCACGTTGGCATTACCTATTCGCCCTCCATGATGCTTCCTGGTTTCTACCTCTTCTTGGTTGATCGCTTCCTGAGGTTTCTACAATCAAGTCGCCAAGTTCGAGTGGTTTCTGCTCGTGTTTTGCCATGTGAAACTGTAGAACTCAACTTCTCTAAGGGCCATGGGTTAACATATAATCCCACAAGTGTGATGTTCATAAATGTTCCAAGCATATCCAAGCTGCAGTGGCATCCATTTACAGTCACTTCTAATAGTAACTTGGAGCCAGAAAAGCTAAGTGTCGTCATTAAAAGTGAAGGAGCTTGGACCCAGAAGCTCTACCAACAGCTTTCAACTTCCACAATAGATCGCCTCGGTGTGTCTGTTGAAGGTCCTTATGGACCTGCTTCATTCAATTATCTAAGGCATGACACACTTGTGATGGTGAGTGGAGGAAGTGGCATAACACCTTTTATCTCCATCATTCGGGAGCTTATATATCAAAGCACTGCACTCAAATGTAAAACCCCAAAAGTTGTTCTCATTTGTGCATTCAAGAAGTCTTCATCTCTGTCAATGCTAGATTTGATCCTTCCAATTTCTGGCACCCCATCTGACGTTTCTAGTCTAGAAGTACAAATTGAGGTTTACATCACAAGAGATAAGGAGCTTCAATCAGAAACCCCAATTCACCCTCAAACCATATTGTTCAAGCCAAAGCCAACTGATGCACCTGTACATGCCATTTTAGGTCCAAACAGTTGGCTCTGGCTTGGTGCTATAATTTCATCCTCATTCATCATTTTCCTTATCATAATTGGGATCATTACTCGTTTCTACATTTTCCCTATCGATCATCATTTGGAACAAACATTCTCATATTCTTTGAGGGCGTTCCTTAACATGATAGCAATATGTGTGTCCATAGCCATTGTTTGCAGCACAGCTGTTCTTTGGAACAAGAAATACAATGCTGAAGAAACAAAGATTCAGAACTTGGTAGGGTCATCAACAACGTCATCAAACTCAATGATTAACAATGAAGATAGAGAGTTGGAAAGCCTTCCATACAATTCCCTTGTTCAAGCTACCAATGTGCATTATGGTGTAAGACCAGACCTAAAAAGACTGCTATTTGAACTCAAAGGGACAAGTGTGGGAGTTGTCGTTTCAGGACCCAAAAGTTTGAGGCATGATGTTGCAGCCATTTGCTCATCTGGTTCAGCTAAAAACCTCCATTTTGAGTCCATCAGTTTTAGCTGGTGA 2130 0.4192 MPEEMVKRSPAQEKYGRIQFAIRLVAVLVFLGWILLWIMAPTNTYAKKWSPQIVKKTISTYFGIQGSNILTFTFPILFIAVLGCVYLQIATKSTIISSSNDLSTMWKSPVLVKGPLGIVSSTELAFLLMFIALLIWSFTTYIYNSFPQITPKSAAAFGMNVWEARLDYAAAWLGRTGTVCLAFLFFPVARGSTVLPLLGLTSESCIKYHIWLGHIVMTIFTSHGICYIILWAATSQISQMLKWNKVGISIVAGEIALLAGLFLWVTTIPRIRRKVFELFFYAHYIYIIFIIFFVFHVGITYSPSMMLPGFYLFLVDRFLRFLQSSRQVRVVSARVLPCETVELNFSKGHGLTYNPTSVMFINVPSISKLQWHPFTVTSNSNLEPEKLSVVIKSEGAWTQKLYQQLSTSTIDRLGVSVEGPYGPASFNYLRHDTLVMVSGGSGITPFISIIRELIYQSTALKCKTPKVVLICAFKKSSSLSMLDLILPISGTPSDVSSLEVQIEVYITRDKELQSETPIHPQTILFKPKPTDAPVHAILGPNSWLWLGAIISSSFIIFLIIIGIITRFYIFPIDHHLEQTFSYSLRAFLNMIAICVSIAIVCSTAVLWNKKYNAEETKIQNLVGSSTTSSNSMINNEDRELESLPYNSLVQATNVHYGVRPDLKRLLFELKGTSVGVVVSGPKSLRHDVAAICSSGSAKNLHFESISFSW* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1864 709 Pfam FAD-binding domain 327 425 IPR013112 GO:0016491
Lja3g1864 709 SFLD Ferric reductase subgroup (FRE) 6 709 - -
Lja3g1864 709 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 415 487 IPR039261 -
Lja3g1864 709 PANTHER FERRIC REDUCTION OXIDASE 2 19 708 - -
Lja3g1864 709 SFLD Ferric Reductase Domain 42 709 - -
Lja3g1864 709 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 323 427 IPR017927 GO:0016491
Lja3g1864 709 CDD NOX_Duox_like_FAD_NADP 330 508 - -
Lja3g1864 709 PANTHER NADPH OXIDASE 19 708 - -
Lja3g1864 709 Pfam Ferric reductase like transmembrane component 174 294 IPR013130 -
Lja3g1864 709 Pfam Ferric reductase NAD binding domain 431 693 IPR013121 GO:0016491
Lja3g1864 709 Gene3D - 597 707 IPR039261 -
Lja3g1864 709 Gene3D - 415 536 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1864 Lja-Chr3 21284827 21288783 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1864 9 709 Miscellaneous Gene Families AT1G01580 56.662 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1864 K00521 - gmx:100790114 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3067 1 37198155 37204105 Lja3g1864 3 21284827 21288783 PCT