Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g3067 ATGGCTATTGAATTAGAGAAAGGGTCATCATCTCAAGAAAAATATGGCAAGGTTCAATTGGCAATAAGGATGTTGGTGCTGGTTCTGTTTCTGGGTTGGATTTTCATTTGGATAATGACCCCCACAAAAACTTACAAACAAACATGGAAGCCTCAACTTCTAGCTAAGACTAGCTCTACCTATTTTGGTGTACAAGGTACAAGACTTTTGCTTTACACTTTTCCAGTTTTGTTCATAGCTGTTTTGGGATGTGTCTACCTCCATATAGCCAAAAAAGCAAACGGTTTCAACTTGCAAAGCTGCAGTTATGTCAAGAAATGTAGAAGGAATCGTCCGGTACTAGTGAGAGGCCCTCTTGGCATAGTCTCTGACACAGAACTGGCCTTTTTGTTTCTCTTCATTGCACTCCTAGTTTGGTCCTTTTCAAATTATCTGCACAACGGATTTGCTAAAATCACCCCGAAATATGCAAAAGAACAAGGCGAGAAAGTATGGGAGAAGAAACTAGATGTTGCAGCTGAGATGTTGGGCGTAGTTGGGAACATTTGTTTGGCATTCCTGTTTTTTCCGGTAACTCGTGGCTCCTCCGTGTTGCCATTGCTTGGACTCACATCAGAGAGTTGCACCAAGTACCATATTTGGCTGGGAAACATTGCCATGACCCTCTTCACTGCTCATGGTGTTTGTTACATCATCAATTGGGCAGTTACTGATCAACTTTGGAAGATGCTAGAATGGAAAAAGACTGGGATATCAAATATTGCAGGAGAGTTAGCTTTGCTTGCTGGTGTGATCATGTGGGCTGCAACCATCCCTCGCATTCGGCGAAAACTGTTCGAGCTCTTCTTCTACACTCACTACCTTTACATCATCTTCATTGTCTTCTTCATCTTCCATGTGGGCATCTCTTTCACATGCATGATGCTCCCTGGTTTCTTCCTCTTCTTAATTGATCGTTACCTTAGATTTTTGCAATCTAGACGCCAAGTTCGTTTGGTTTCTGCTAGAGTGTTGCCATGTGAAACAGTTGAACTCAACTTCTCTAAGAACCATGGTCTAAGTTATAATCCAACAAGTATTATGTTCATAAATATTCCAAGCATATCCAAGCTACAATGGCATCCATTTACCATTACTTCTAATAGTAATTTGGAGCCAGAAAAGCTGAGTGTTGCCATCAAAAGTGAAGGAACATGGTCCCATAAACTCTACCAGATGCTTTCAACATCTTCTGCAGCAGATCATCTCAACGTCTCTGTTGAAGGTCCTTATGGACCTGCATCAACAAATTATCTCAGGTATGACACTCTAGTGATGGTTAGTGGAGGGACTGGAATAACTCCATTCATCTCAATCATCAAGGAGCTAATGCATTTGAGCACAACATTCAGATACACAACCCCAAAAGTGATACTGATTTGTGCTTTCAAGTACACTTCAGGTCTCTCAATGCTTGATCTCATCCTTCCAAATTCTAGCACCCCCTGTGACATTTCTAACATGAAACTACAGATTGAGGCCTACATCACAAGAAAGAGTGAGCCTAAATTGAATAGCCCAATGAACCTTCAACAAATATGGTTCAAGCCTAATGCAAGAGATGCACCAATATCTTCTATCTTAGGACCAAATAGTTGGCTATGGCTATGTGCTATAATCTCTTCCTCTTTCATAATTTTCCTTATCTTAATTGGGGTCATTACCCATTACTTCATTTTCCCTGTGGATCATAATTCAAACAAAATATTTTCATACCCTCTGAAGTCTTTCCTCAATATGTCAACAATGTTTGTGTCCATAGCCATGGCTGCTAGTGCAGCTGTTCTATGGAACAAGAAACACAATGACAAAGAAGAAGAGCAGATTCAGAACTTGGAGGCAGCATCAGTGTCCACAATGTTTAAGATTCATGAAATAGATAGAGAATTGGAAAGCCTACCACTTCAACAATTTGCTCAAGTTACAAATGTGCATTATGGTGTAAGACCTGATCTAAGAAGACTAATATCTGAACTGAATGGGTCAACTGTGGGAGTTCTTGCTTCTGGGCCCAAGAAAATGAGACAGGAGGTTGCAGCCATTTGCTCATCTGGTTCAGCTGAAAATCTGCATTTTGAGTCCTTAAGCTTTACGTGGTAA 2139 0.4067 MAIELEKGSSSQEKYGKVQLAIRMLVLVLFLGWIFIWIMTPTKTYKQTWKPQLLAKTSSTYFGVQGTRLLLYTFPVLFIAVLGCVYLHIAKKANGFNLQSCSYVKKCRRNRPVLVRGPLGIVSDTELAFLFLFIALLVWSFSNYLHNGFAKITPKYAKEQGEKVWEKKLDVAAEMLGVVGNICLAFLFFPVTRGSSVLPLLGLTSESCTKYHIWLGNIAMTLFTAHGVCYIINWAVTDQLWKMLEWKKTGISNIAGELALLAGVIMWAATIPRIRRKLFELFFYTHYLYIIFIVFFIFHVGISFTCMMLPGFFLFLIDRYLRFLQSRRQVRLVSARVLPCETVELNFSKNHGLSYNPTSIMFINIPSISKLQWHPFTITSNSNLEPEKLSVAIKSEGTWSHKLYQMLSTSSAADHLNVSVEGPYGPASTNYLRYDTLVMVSGGTGITPFISIIKELMHLSTTFRYTTPKVILICAFKYTSGLSMLDLILPNSSTPCDISNMKLQIEAYITRKSEPKLNSPMNLQQIWFKPNARDAPISSILGPNSWLWLCAIISSSFIIFLILIGVITHYFIFPVDHNSNKIFSYPLKSFLNMSTMFVSIAMAASAAVLWNKKHNDKEEEQIQNLEAASVSTMFKIHEIDRELESLPLQQFAQVTNVHYGVRPDLRRLISELNGSTVGVLASGPKKMRQEVAAICSSGSAENLHFESLSFTW* 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g3067 712 CDD NOX_Duox_like_FAD_NADP 332 511 - -
Lja1g3067 712 PANTHER FERRIC REDUCTION OXIDASE 2 19 711 - -
Lja1g3067 712 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 325 430 IPR017927 GO:0016491
Lja1g3067 712 Pfam FAD-binding domain 329 428 IPR013112 GO:0016491
Lja1g3067 712 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 418 488 IPR039261 -
Lja1g3067 712 Pfam Ferric reductase NAD binding domain 434 696 IPR013121 GO:0016491
Lja1g3067 712 Gene3D - 418 542 IPR039261 -
Lja1g3067 712 Pfam Ferric reductase like transmembrane component 176 296 IPR013130 -
Lja1g3067 712 SFLD Ferric reductase subgroup (FRE) 14 712 - -
Lja1g3067 712 PANTHER NADPH OXIDASE 19 711 - -
Lja1g3067 712 SFLD Ferric Reductase Domain 41 712 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g3067 Lja-Chr1 37198155 37204105 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g3067 3 712 Miscellaneous Gene Families AT1G01580 54.207 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g3067 K00521 - gmx:100814642 1070.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3067 1 37198155 37204105 Lja1g3067 1 37198155 37204105 ECH
Lja1g3067 1 37198155 37204105 Lja3g1864 3 21284827 21288783 PCT