Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1851 ATGAAGAAGTTTGTGCTCAAGTTAGATTTGCATGATGACAAGGACAAGAAGAAGGCCCTGAAAACAGTTTCAACTCTGACAGGTATTGATGCCATCTCCATGGACATGAAAGAGAAGAAATTAACAGTGATAGGAACAGTGGATCCAGTTACTGTGGTTAGCAAATTGCGCAAATACTGGCAGACAGATATAGTAGCAGTAGGACCAGCCAAAGAGCCAGAGAAGAAGAAAGAGGAGCCCAAGAAAGAAGAGGCCAAGAAGGAAGGAGAAAAGAAAGAGGAACAGAAGAAGGAAGAGGGGAAGAAGGAAGAATCAAAAAAAGAAGAGAAGAAAAAAGAACCTGCCCCAGATCCTGTTTTGGAGCTGGTCAAGGCTTACAGGGCTTATAATCCATACATGACCACACACTACCATGTACAAAGCATGGAAGAGAATCCCAATGCCTGTGTCATTTGTTGA 459 0.427 MKKFVLKLDLHDDKDKKKALKTVSTLTGIDAISMDMKEKKLTVIGTVDPVTVVSKLRKYWQTDIVAVGPAKEPEKKKEEPKKEEAKKEGEKKEEQKKEEGKKEESKKEEKKKEPAPDPVLELVKAYRAYNPYMTTHYHVQSMEENPNACVIC* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1851 152 Pfam Heavy-metal-associated domain 9 58 IPR006121 GO:0046872
Lja3g1851 152 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 152 - -
Lja3g1851 152 Gene3D - 1 72 - -
Lja3g1851 152 Coils Coil 82 113 - -
Lja3g1851 152 MobiDBLite consensus disorder prediction 67 120 - -
Lja3g1851 152 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 152 - -
Lja3g1851 152 SUPERFAMILY HMA, heavy metal-associated domain 1 58 IPR036163 GO:0046872
Lja3g1851 152 MobiDBLite consensus disorder prediction 69 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1851 Lja-Chr3 21059608 21061486 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1851 - - gmx:100499838 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1851 3 21059608 21061486 Lja3g1851 3 21059608 21061486 ECH
Lja1g3055 1 36979749 36982956 Lja3g1851 3 21059608 21061486 PCT