Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1842 ATGTCGCAGTTGCTGAATAAAGCCAAGAACTTCGTATCCGAGAAGGTCAACGACGTGGCCAAGCCGGAGGCGAGTGTGACAAACGTGGACTTCCAGCGCGTGACCAAGGACAGTGTCGAGTATTTGGCCAATGTCTCTGTTCATAACCCTTATTCCACTCCAATCCCCATTTGTGAGATCAACTACTCTTTCAAAAGCGCCACCAGGGAGATAGCATCTGGAAGGATACCGGACCCTGGTTCCTTGAAGGCGAAGGACATGACAATGGTGAATGTGCCGGTGAAGGTGCCGTACAGCATATTGATGAGCTTGGCAAAGGATATTGGAGCTGATTGGGATATTGACTATCAACTGGATATTGGTCTGGTTATTGACCTTCCTGCAATTGGCAACTTCACCATTCCTCTTTCTCACAAGGGAGAGGTCAAGCTACCAAACCCTGCTAGCATGTTCGCCTAG 459 0.4902 MSQLLNKAKNFVSEKVNDVAKPEASVTNVDFQRVTKDSVEYLANVSVHNPYSTPIPICEINYSFKSATREIASGRIPDPGSLKAKDMTMVNVPVKVPYSILMSLAKDIGADWDIDYQLDIGLVIDLPAIGNFTIPLSHKGEVKLPNPASMFA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1842 152 Pfam Late embryogenesis abundant protein 44 140 IPR004864 -
Lja3g1842 152 SMART why 24 141 IPR013990 GO:0009269
Lja3g1842 152 Gene3D - 17 151 - -
Lja3g1842 152 PANTHER - 1 152 IPR045043 -
Lja3g1842 152 PANTHER DESICCATION PROTECTANT PROTEIN LEA14 1 152 - -
Lja3g1842 152 SUPERFAMILY LEA14-like 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1842 Lja-Chr3 20893540 20895050 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1842 - - gmx:547533 260.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1842 3 20893540 20895050 Lja3g1842 3 20893540 20895050 ECH
Lja1g3047 1 36872416 36874736 Lja3g1842 3 20893540 20895050 PCT