Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1795 ATGGCTGTGAAGAAGATGTTGGAGAAAGTGGAAGAATTTGACATGGACAAAGTGATAGAGGAATTTGAGAGGCTTACCAAGGATGCTGAGGGGGTTCAGAGGGAAACTTTGAAGAGGATATTGGAAGAAAATGCTTCAGCTGAGTACTTGCAGAGTTTGGGACTTAATGGAAGAACTGACCCTGAGAGTTTCAAGTCATGTATTCCTCTGGTCACTCACAAGGAATTGGAGCCTTTTATCAACAGAATGATTGATGGAGATGCTTCTCCAATTCTCACTGGAAAACCCATCACAGCCATGTCTTTAAGTTCTGGCACTACTTCTGGGAAGCAAAAATATGTACCATGGAATGATGAATTGTTTGAAACCACATTGCAGATATATCACACCGCTTTTGCCCATAGGAACAGAGAGTTTCCAATTAATGGCAAGGCCTTAAGCTTTATCTACAGCAGCAAGCATTTCAAAACAAAAGGGGGTGTCACAGCAGGAACTGCCACAACCAATGTGTTCCGCAACCCCGGGTTCAAGCCTTCAATGAAGGCGCTTAAGTCCTCGTGTTGCAGCCCAGATGAAGTGATATTTGGTCCCGATTTTCACCAATCGCTGTATTGTCACCTCTTGTGTGGCCTAATTTTCCGCGAGGAAGTTCAATTGGTGTCTTCTACGTTCGCGCACAGCATTATCTACGCATTCAGAACCTTTGAGCAAGTTTGGGAAGAGCTTTGTGCTGATATAAGGGAAGGTGTTCTTAACAGGAGCATCGTGGTCCCCTCGATTCGAACCGCTATGTCTAAACTGCTTAAACCGGACCCTGAACTCGCGAACCTGATCAAGAGAAAGTGCTTGGGATTGAGCAACTGGTATGGATTGATACCAGAGCTTTTCCCAAATGCTAAGTATGTTTATGGGATCATGACAGGGTCAATGGAGCCTTATTTGAAAAAGCTGAGGCACTATGCAGGAGTGTTGCCTTTAGTGACTTCTGATTATGGATCTTCTGAAGGGTGGATAGCAACCAATGTGAACCCAAGAGTGCCTCCTGAATTGGCCACTTATGCTGTTCTTCCTCAAATTGGTTACTTTGAATTCATCCCTCAGAGTGAGTTGGAGGAAACCAAGGGAGATACTAGTTTTCTCTCTGTGGATCCTCAAACAGTGGGTTTGACTGAAGTGAAAATTGGTGAGGAGTATGAGATTGTTATCACCAATCCTGCAGGCTTATATCGGTATAGGCTAGGAGATGTGGTCAAGGTTATGGGGTTCCATAACTCATCTCCAAAACTCAAGTTTGTTCGGAGGAACAATCTTCTGCTTACAATCAACATTGACAAGAACACAGAGAATGATTTACAATTAGCTGTGGAAACAGCATCCAAATTGTTAGCAGAGGAGAAAGTGGAAGTTGTTGACTACACCAGTCATGTTGATGTGTCGAAAGAACCGGGGCACTATGTTATCTTCTGGGAAATCAATGGCGAAGCGAGCGAAGAAGCACTTGGTGAATGCTGCAATTGCTTGGATAAGTCCTTTGTGGATGCTGGCTACACCAGTTCTCGCAAAGTAAATTGCATTGGCCCGCTCGAGCTCCGAGTTGTTAGACGAGGAACGTTTCGGAAGATTCTTGATCATTACTTAGCATTAGGGAACACGGGGAATCAGTTCAAGACTCCAAGGTGTATTAGTCCTGCAAACACCAAAGTGAGGCAAATATTGTGTGACAATGTGGTGAACAACTATTTCAGTGTTGCTTTCAATTGA 1761 0.4395 MAVKKMLEKVEEFDMDKVIEEFERLTKDAEGVQRETLKRILEENASAEYLQSLGLNGRTDPESFKSCIPLVTHKELEPFINRMIDGDASPILTGKPITAMSLSSGTTSGKQKYVPWNDELFETTLQIYHTAFAHRNREFPINGKALSFIYSSKHFKTKGGVTAGTATTNVFRNPGFKPSMKALKSSCCSPDEVIFGPDFHQSLYCHLLCGLIFREEVQLVSSTFAHSIIYAFRTFEQVWEELCADIREGVLNRSIVVPSIRTAMSKLLKPDPELANLIKRKCLGLSNWYGLIPELFPNAKYVYGIMTGSMEPYLKKLRHYAGVLPLVTSDYGSSEGWIATNVNPRVPPELATYAVLPQIGYFEFIPQSELEETKGDTSFLSVDPQTVGLTEVKIGEEYEIVITNPAGLYRYRLGDVVKVMGFHNSSPKLKFVRRNNLLLTINIDKNTENDLQLAVETASKLLAEEKVEVVDYTSHVDVSKEPGHYVIFWEINGEASEEALGECCNCLDKSFVDAGYTSSRKVNCIGPLELRVVRRGTFRKILDHYLALGNTGNQFKTPRCISPANTKVRQILCDNVVNNYFSVAFN* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1795 586 Pfam GH3 auxin-responsive promoter 21 562 IPR004993 -
Lja3g1795 586 Coils Coil 15 35 - -
Lja3g1795 586 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 6 586 - -
Lja3g1795 586 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 6 586 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1795 Lja-Chr3 20246146 20251214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1795 22 582 EF-hand Containing Proteins AT1G23160 38.475 6.36e-136 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1795 K14506 - gmx:100813492 977.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1795 3 20246146 20251214 Lja3g1795 3 20246146 20251214 ECH
Lja1g0110 1 945728 950100 Lja3g1795 3 20246146 20251214 PCT