Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1793 ATGGAGGACTCAGCCAAGCTCCGATTGGTGCGGTGCCCCAATTGTCAAAACCTCCTTCCTGAGCTTGCTGATTACTCTGTTTACAAATGTGGTGGTTGTGGTGCTGTTCTTAGAGCGGGGCTTAATGGTTATGGAAATGGTAGCTTGTGGGAGATTTCAGATGAGGGACAGGGTGGAGGAGGTCTTGCTAAATCAGGAAAATCCTTGGGGAAAGGGGTAGTTGATTTGAGTGATAATTCAGATATTGATGTTAAGTCAAATGGTGGTTCGTCAGGGAAACAAAATAATGGACATGTAAGGATTCTGAATCATTTTGAGGATGGTGATGAGGAAGGGGTTTTGGAGAATGGATTTGATGTTAATAGGAACCAAGATAGATGGGGTAAATCATTAGGAAAAGAGCAGCAAGAACACAATTCTCGAATGGGAGGGTCCAAATTCTCCGTGAGAAGGTCTGAGAGACGTGAGGTGGAGGAATTTTGGAGAAAGCCATCAGCTGATATGGAAGGTGTGAGATTTTCCAATTTGAACTATCCTGATGAAGGAACTTCAAATGGCTATTCCAGTTCTTCTTACAAGTATGGGGAACAATGGAGGGATTATAAAGACATGGATGGAGTGAGCAAGGTTCAGCACCTTGAGCAAGATAGAGCTGATCTTCTAAGGAAGCTGGAAGAGTTATCCATGCATCTGAACAAGTCTTCTGAAATGGTTAATAAACCTAAAGAAAAGGTTCTTCCGGATGGAAAGGTGGTTCCTCCAGGTCCTTACAATGGCCCTGATGCTTGGTTTCGAGATGGACCGTCAGGGTTGAACAGGACCTCAAGGCAATTCATTGACCCTAATAAACATATGGCAAATTCCCCTGATTTCAATTACTATCATGATCCATATGCTTATAATACAAATGGTCATGAAAGAGCCATGTTTGACTTCCATCCTTCAATCCCTAACCCAAGTTTTATTCCTGGATATGGGGATCCTTTCATGTCGCCAATGATGAGAGGTCCGCATCCGTTACCACATCAGTTCCGGCAACAGCCAATTCATCCCTACTTTCCCGGCCATTATGCTGATGGTCCAGATTCATATGGACCATATGCACATCGTGCTATGCCTCACCCGCATTCTTGCTCTTGTTTTCATTGCTATGAAAACAAAAGAAGAGGTTCAGTGCCAGCACCACCTGCTGGAGTCATTAACAGCAGATTCGCTCGTGGCACGAATGATCCTATGGTATACCATCATGAGATCCCGGGGGCTGTTGGTCCACAGATTCATAATTCTAGAACTTCCATTCCTGCAGTTGGTTTTCAAGAAAAGCAATTGCATACAAGACGGCCTGGCGACTTCAATTCTGAGATGGGTGGATTTGTCCGAAACTCTCCTAGAAAAGTAATGCCAGCTAGTAGGCGGCCTTGCCATCCTATAGCTGGTGGTTCTCCTTTCATCACATGTTATAACTGTTTTGAGCTACTGCAACTGCCTAAAAAAGCACTGGTTATGGGGAAAAATCATCAGCAGAAAGTGAAATGTGGGGCTTGTTCAACAGAAATTAATTTTTCTGTCATCAATAAGAAGCTAGTTGTTTCTTTTCATCCAGAAATGGAGGAAACTGCCACAAGGATTGATGATAGCTCTATTGAGGTTGTGAATAGTTGTGTGTCACATTCACATGGTCATGTAAACGCGAGTGGTGTTAACTTCTCATCTGATGATTATTCTGGTTATGATTTTCATTCAGTAGATAGAGAATCTCCTGTGCTGGCTGCAGATCCAAGCTTGAGCTCTAGCAAGTCCCAGGAGATGCAAAAATTCCATTCTTCATCTCACAGTACCTCTGAAGATGTAAATAGTCCAGAAGTTTTGATTGCACCAGGCGAAGTCACTAAGTCCGTTCATCAGCCAATTGAAGCCTCTCTGTCGCCTTCACCCCCCGGCTCACCTCTTCAAGAGAATGTTGATTGTTCTAGTAATATTTACCATGCAGTGAATCGGTTTGGAAAAGGCAACAGAAGTAGTCGCTTAGATCAAGAGAAGGCAAAAATAGAAAAGAATACCTCAAGGCAGAATTCTTTGAAACAGGTAGTGCTTGCAAGTGAGATGGATGTCCATGATTATTCTAACATCGGAGTCTCACAGGTTTCTCGTGATGCAAGCCAAGAACATGACCATAACAAAGGAGGTGAATCGTTTTTTGCAAACATTATCAAGAAAGGCTTCTGGGATTTCTCCCAATCTAACAAAATAGATGATCCTGAAAAATGTAATGTTACTGTGAATGGACGACCCATATCAGATCATGCGATTAAGAAAGCTGAAAAGCTAGCTGGGCCAATCCAGCCAGGAAATTACTGGTATGATTTTCGGGCTGGATTTTGGGGTGTCATGGGTGAACCGTGTCTTGGAATAATTCCATCACACATAGAAGAGTTCAATTATCCCATGCCAGATAAATGTGCTGCTGGAAATACTGGCGTTTTTGTGAATGGTAGGGAACTTCATAAAAAAGATTTAGATTTGCTTTCTCGTAGAGGACTTCCTAATAATAGAGATAGATCTTATATCATTGAAATTTCTGGGAGAGTCCTGGATGAAGACACAGGGGAAGAGCTTGACAGCCTTGGTAAACTTGCACCAACGGTGGAGAAAGCAAAGAAAGGATTTGGCATGAGAGTACCCAAGGCAGCTGCATAA 2697 0.4279 MEDSAKLRLVRCPNCQNLLPELADYSVYKCGGCGAVLRAGLNGYGNGSLWEISDEGQGGGGLAKSGKSLGKGVVDLSDNSDIDVKSNGGSSGKQNNGHVRILNHFEDGDEEGVLENGFDVNRNQDRWGKSLGKEQQEHNSRMGGSKFSVRRSERREVEEFWRKPSADMEGVRFSNLNYPDEGTSNGYSSSSYKYGEQWRDYKDMDGVSKVQHLEQDRADLLRKLEELSMHLNKSSEMVNKPKEKVLPDGKVVPPGPYNGPDAWFRDGPSGLNRTSRQFIDPNKHMANSPDFNYYHDPYAYNTNGHERAMFDFHPSIPNPSFIPGYGDPFMSPMMRGPHPLPHQFRQQPIHPYFPGHYADGPDSYGPYAHRAMPHPHSCSCFHCYENKRRGSVPAPPAGVINSRFARGTNDPMVYHHEIPGAVGPQIHNSRTSIPAVGFQEKQLHTRRPGDFNSEMGGFVRNSPRKVMPASRRPCHPIAGGSPFITCYNCFELLQLPKKALVMGKNHQQKVKCGACSTEINFSVINKKLVVSFHPEMEETATRIDDSSIEVVNSCVSHSHGHVNASGVNFSSDDYSGYDFHSVDRESPVLAADPSLSSSKSQEMQKFHSSSHSTSEDVNSPEVLIAPGEVTKSVHQPIEASLSPSPPGSPLQENVDCSSNIYHAVNRFGKGNRSSRLDQEKAKIEKNTSRQNSLKQVVLASEMDVHDYSNIGVSQVSRDASQEHDHNKGGESFFANIIKKGFWDFSQSNKIDDPEKCNVTVNGRPISDHAIKKAEKLAGPIQPGNYWYDFRAGFWGVMGEPCLGIIPSHIEEFNYPMPDKCAAGNTGVFVNGRELHKKDLDLLSRRGLPNNRDRSYIIEISGRVLDEDTGEELDSLGKLAPTVEKAKKGFGMRVPKAAA* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1793 898 Coils Coil 210 230 - -
Lja3g1793 898 MobiDBLite consensus disorder prediction 590 619 - -
Lja3g1793 898 MobiDBLite consensus disorder prediction 591 619 - -
Lja3g1793 898 MobiDBLite consensus disorder prediction 446 470 - -
Lja3g1793 898 MobiDBLite consensus disorder prediction 669 688 - -
Lja3g1793 898 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 896 IPR040244 GO:1900150
Lja3g1793 898 Pfam Probable zinc-ribbon domain 478 523 IPR021480 -
Lja3g1793 898 MobiDBLite consensus disorder prediction 672 687 - -
Lja3g1793 898 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1793 Lja-Chr3 20228761 20233722 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1793 - - aprc:113849738 1293.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1793 3 20228761 20233722 Lja3g1793 3 20228761 20233722 ECH
Lja1g0104 1 858513 863502 Lja3g1793 3 20228761 20233722 PCT