Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0104 ATGGAGGATTCGGCTAAGGTGCGGTTGGTGCGGTGCCCCAAGTGTGAAAATCTCCTTCCTGAGCTCGCTGATTACTCTGTTTATCAATGTGGTGGTTGCGGTGCTGTTCTTCGAGCGAAACATAAAGGTTATGTGAGTGGTAGCTTGTCAGATGAGGGTAAGGTCGGAGGAGATTCTTGCAGATCAGAAGGTTCATTGGTGAAAGGCTTAGTTGATCCTGGTGATACTTCAGGTGTTGTTGATGCAAACTCGAGCAGCAGTGGTCCCTCGAAGGATGATAATCCAAGTGATATGTATAAAGCAGATAACAGACAGGAGAGGATTCTGAATCAATTGGAAGATGCTGATGAGAATGGGGATTTTGAGAATGATGTTGATATCAACAGAGACAGTGATAGAAGGGGTAAAGCAGTAGGAAGAGAACATGAGGAGGCCAAGACTCAAATTGGTCATGAAAATGGGTCCAAATTCTCTGGCAGAAATTCTAATTGGCAAAATGGAGAGACAAGTGAGATGGAGAGGTTTTGGAGAAAGCAACGAGCTGATATGGAAAGTGTGAGATTTTCCACCATGAATTTGCATGACGAGGGACCTTCAAATGGCTATTCCGGTTGTTCTAGCAACTATATGGATCCGTGGTGGAACAATAAAGAAACAAATGGTGCGAACAAGGTTCAGCATCTTGAGCAAGATCGAGCTGAGCTTCTAAGGAAACTGGATGAGTTAAAGGACCAGCTCGGTAAGTCTTCTGAAGTGGTGAAAAACCCAAAAGAAAAGGTTCTTCCTGATGAAAGGGTGGTTCCTCCAGATCCTCATCCTTACGGTGGTCCTGATCCTTGGTTTTCTGATGGGTTGAACAGGACTTCAAGGCAATTTTTCAGAACTGATAAACATATGGCAGGTCCCCCTCATTTCAATTATCATCATGATCCATACCTTTATACAAGTGGTCATGAAATGCCTATGCCCAACTTCCATCCTTCAGTGCATAATCCGAATCAATATGGGGATCCTTTTGCATCCCAAACGCTGAGGAGAGGTCCACATCAGCTGCCCCATCAGTTCCCGCAATCCATGCATCCGTACTTTCCGGGAAGGTATGTTGATGCTAATCTGGATTCATACGAACCATATGCACATAATGCGATGCCTCACCCGCCTTCTTGCTCTTGTTTCCATTGCTATGACAACAAACGAAGGGGTACAGTACCGATGCCGCCTGCTTCTTTCATTAACAGCAGATTTCCCGATACCTCCAATGATCCTATGTTGTATCATCGTGAAATGCCAGGGGCATTTGGTCCACATGTTCATAATTCTAGAACTTCCATTCCTCCTGTGCATTTTCATGAAAAACAATTACATACAAGATGGCCTAGTGACTTCAACTCTGACATTGGCGGTGTTGTTCGAAGCCGTCCTCGGAATGTAATGGTAGCTACTAGCAGCCGACGTTGTCGTCCTGTGGTTGGTGGTTCGCCTTTCATCACATGTCCTACTTGCTTTGAGTCGCTGCAACTGCCTAAAAAAGCAATTGTTATGGGGAAAAATCATCAGCAGAAAGTGCAATGTGGGGCTTGTTCTTCTGAAATAAGCTTTGCTCTCATCAGTAAGAAGCTGGTTATTTCTCCTCATTCAGAAACGGAAAGAGTTCCCCCGAGAGGTGATGATAGCTCTAATGAGGTTTTGAGTGGCCATGTGTCACATTCCCGGGGTCATGTGAACAGGAGTGGTGCTAACTTCTCATCTGATGATTATTCTGGCTATGATTTTCTCTCAATAGATAAAGAACCTCTTTCACTGGTTGCTATGAACTCTGACAAGTCCCATGAGATGCAGAACTTCCATTCATCTCCCAGTACCTCTGAAGATGAAAATAGTCCAGAAGTGATGATTGCTTCAAGGGAGGTTACTAAGTCCATTCTTCATCCAACTAAAGACTCTGTATCTCCTCCTGCTGGTTCACCTCTGCAAGAGTATTTTGATTACAATAGTAATAGTCATGCAGTAAATCGGTTTGGAAAAGGCAACCGAAGTAGTCGCTCAGAGCAAGAGAAGGCAAAACTGGACAAGATTACATCACGCCAAAATTCTTTGAAAGAGGCAGCGCTTGCAACTGAGATGGATGTCCATGATTATTCTAACACTGGAGTCTCCCAGGATTCTAGAGATGCTAGCCAAGATAACGGCCATGCCAAATCCAACAAAGGGGGTGAATCATTTTTTGCTAGCATTATCAAGAAAAGCTTCCGAGATTTCTCCCGATCTAACCAGACAGATGGCCGTGGAAAAATTGATGTTACTGTAAATGGGCAGCCCTTATCAGACCGTGCGATTAAGAAAGCTGAAAAGCTAGCTGGACCAATCCAGCCTGGAAATTATTGGTATGATATTCGAGCTGGATTTTGGGGTGTCATGGGTGGGCCTTGTCTTGGAATAATTCCACCATTTATAGAAGAGTTCAATCACCCCATGCCGGACAAATGTTCTGGTGGGAGTACTGGTGTTTTTGTAAATGGTAGAGAGCTTCACCAAAAAGATTTGGATTTGCTATCTGGAAGAGGACTGCCCTCTGATGGAGATAGATCTTATATCATTGAGATTTCTGGGAGAGTCCTGGACGAAGACACAGGAGAAGAGCTGGACTGCCTAGGCAAACTTGCACCTACAGTGGAGAAAGTGAAGCATGGATTCGGCATGAAAGCGCCTAGAGCAGCTACTTGA 2724 0.4446 MEDSAKVRLVRCPKCENLLPELADYSVYQCGGCGAVLRAKHKGYVSGSLSDEGKVGGDSCRSEGSLVKGLVDPGDTSGVVDANSSSSGPSKDDNPSDMYKADNRQERILNQLEDADENGDFENDVDINRDSDRRGKAVGREHEEAKTQIGHENGSKFSGRNSNWQNGETSEMERFWRKQRADMESVRFSTMNLHDEGPSNGYSGCSSNYMDPWWNNKETNGANKVQHLEQDRAELLRKLDELKDQLGKSSEVVKNPKEKVLPDERVVPPDPHPYGGPDPWFSDGLNRTSRQFFRTDKHMAGPPHFNYHHDPYLYTSGHEMPMPNFHPSVHNPNQYGDPFASQTLRRGPHQLPHQFPQSMHPYFPGRYVDANLDSYEPYAHNAMPHPPSCSCFHCYDNKRRGTVPMPPASFINSRFPDTSNDPMLYHREMPGAFGPHVHNSRTSIPPVHFHEKQLHTRWPSDFNSDIGGVVRSRPRNVMVATSSRRCRPVVGGSPFITCPTCFESLQLPKKAIVMGKNHQQKVQCGACSSEISFALISKKLVISPHSETERVPPRGDDSSNEVLSGHVSHSRGHVNRSGANFSSDDYSGYDFLSIDKEPLSLVAMNSDKSHEMQNFHSSPSTSEDENSPEVMIASREVTKSILHPTKDSVSPPAGSPLQEYFDYNSNSHAVNRFGKGNRSSRSEQEKAKLDKITSRQNSLKEAALATEMDVHDYSNTGVSQDSRDASQDNGHAKSNKGGESFFASIIKKSFRDFSRSNQTDGRGKIDVTVNGQPLSDRAIKKAEKLAGPIQPGNYWYDIRAGFWGVMGGPCLGIIPPFIEEFNHPMPDKCSGGSTGVFVNGRELHQKDLDLLSGRGLPSDGDRSYIIEISGRVLDEDTGEELDCLGKLAPTVEKVKHGFGMKAPRAAT* 908
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0104 907 PANTHER EXTRA-LARGE G-PROTEIN-LIKE 1 905 IPR040244 GO:1900150
Lja1g0104 907 MobiDBLite consensus disorder prediction 78 93 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 47 99 - -
Lja1g0104 907 Coils Coil 225 252 - -
Lja1g0104 907 Pfam Probable zinc-ribbon domain 491 535 IPR021480 -
Lja1g0104 907 MobiDBLite consensus disorder prediction 247 281 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 678 695 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 608 737 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 659 677 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 247 266 - -
Lja1g0104 907 PANTHER EXTRA-LARGE G-LIKE PROTEIN 1 905 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 112 171 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 151 170 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 122 150 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 608 628 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 545 579 - -
Lja1g0104 907 MobiDBLite consensus disorder prediction 561 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0104 Lja-Chr1 858513 863502 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0104 - - gmx:100795121 1426.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0104 1 858513 863502 Lja1g0104 1 858513 863502 ECH
Lja1g0104 1 858513 863502 Lja3g1793 3 20228761 20233722 PCT