Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1784 ATGGAGGAGCATGAGGGGTGGGCACAGCCATCAAATGGGCTATTGCCAAATGGCTTGTTGCCCAATGAAGCCGCCTCTGTGATGAAGGTGCTTGACTCGGAGCGATGGTTGAGGGCTGAGGAAAGGACTGCAGAACTCATTGCTTGCATTCAGCCTAATGCACCCTCCGAGGAGCGCCGTAATGCAGTTGCTGACTATGTCCAGAGGCTGATCATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGCTCGGTTCCCCTCAAAACTTATTTACCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATATGAAGGATTCATGGGCACATCAGGTTCGTGACATGCTGGAGAGTGAGGAGAAGAATGAGCATGCAGAGTTTCATGTCAAGGAGGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTCGAGGAGGTTGATAATCTGATTAACCAAAATCATTTATTCAAGCGTAGCATTATACTGATTAAAGCCTGGTGTTACTACGAGAGCCGTATACTTGGTGCTCACCATGGTCTTATCTCGACTTACGCATTAGAAACCTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCACTTGAGGTATTGTATCGATTCTTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTCTGTGTTAGTCTATGGGGTCCAGTACCCATTAATTCACTCCCAGATGTGTCAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTACTCAGCAAGTTATTTCTTGATGCTTGCAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCGTTTGTTTCTAAGTTTTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGCCGTAGTGTCAGCAAAGGCAATTTCTTTAGGATCCGCAGTGCCTTCGCATTTGGGGCTAAGAAGCTGGCCAGATTACTTGATTGTCCAGAGGAGGATTTGCATTTTGAAGTCAATCAATTCTTTTTGAATACTTGGGACAGACATGGAAGTGGACAACGACCTGATGTTCCAAGCAATGACTTATGCCGTACAAGATTATCTAGTCATGACCAATTACAGAGATCTGATAATCTCAGGAACAATGATCATAAAATTGATAATACCTCCAATCGTGAATTTCATATTGAAGGGGAACATGTTTCACATAGCGGTCTATCCCAGCATAGTAATATATCATCTGGAAATTCATCTAAAAGTACAGTGTTACGTACTCTGAGTCAAAGGAGTTACGGAATCCAAAATAATTCAAAGAACATTGATCAAGTCCAAAGGGAAACTAGTTCTAATCAAGGTGCACATGGTGATAAAGGTCAGAGAAATGTTAAATCCATTAACTCAGTAAGTGGTGTTCCAGGAAGATTCCTATTTGCCAGGACACGTTCTAGCCCTGAGCTGACTGACTCATATGGTGAAGTTTCTTCCCAAGGAAGGCGTATAAAAGCAACAGAAAGTAGTAAAGGCCAGAATTCCTTTGTAAAGTTAGAAAATAGTCGTAGGAAAAACTTTGAACCTGATGCAGCTGTAAGAATTGATGACTTTTCTGCTAGGCACATCTCATCTCATCAAGTTCTTGGTAATGCTGTTCATTCAAATGGTACTCATGATGAATCAGGCTCAGGTGTCACAGGTGAAGAGTTTGCACCGATTGCAGGGCCCAGTGGAATGCAGATGATGCATCAGGAGGAGCAAGACCTTTTGAATATGATGACTTCTCCTATTCCTCAAGGTTACAGTGGTCAGGCTCATGTTCCAATGAATTTTGCTCCTGGTCACCTACCATTCCCCTTTCCACCTTCTGTTCTTGCATCTATGGGATATGCTCAGAGAAATATGGGTAACATTCCCTTTATTGAGGCTCCTTGGGGTGCAAACATGCAATTTCCTCCAGGTTTAGTTCCTTCACCATTGACTCCATATTTCCCTGGCATGGGGTTGACACAAAGTCCTCAAGATTTATCTGAAACGGGCAATGAGAATTTTAGTTCAGTTGAAATGAACATAACAGAAGCTGATAATGATTTCTGGCATGAGCAGGAAAGAGGTTCTGCTAGTGGGGTCGAAGTTGATAATGGAACTTTTGAAATGCTTCCAGATGATAAGCAACAGTCAACTTCAAGTAGTCATAACTTTTCCCAATCTTCTCGGGTTGGCAGCTCTAGTAGTTCTGGCAGATTTCAGCAGAAGTTTAGTAAAGAAAACCGAGGATCAACAAGAGAAGAGCATATTGATAATTTTCATTATCAAGATGGCCAAAGAAATGAGGTTTATTTTGACGATAGAGTAGCTAATTCTGAGTTACCCAGTGTACCTCATTCAAGCTCCTTCAGAAGTAAGAGCTCTTCCGAAAGTTCTTGGGATGGATCATCGGCCAAATCCTCAAAATCAACAAGGGATAGAAGGGGAAGAAAAACTACACCCCCAGTGGCATCTGCTGTTAACGGGAAGGGTAAGAATGCCTCAGAAATTTCAACTAACCGAATAGATGATGAAAACAGAGAGTGGACTTCTGTCTCGACCATGGCATCTGATATGTCAGAAAGAAGCACTGGGCCCTCGGCTGGTACTTCCATGCATGTTCCAAGGCATCAAACATCTGGTTTTGAAGCTGCTCAGACAAGTGGGCCAGATTCACCACTAACCATAGCTCCTGTGCTTTTAGGTCCTGGTTCTCGCCACAGAGCAATTGGTAATTCTGGAGTTGTTCCATATGCATTCTATCCTACAGGGCCACCAGTACCTTTTGTTACGATGGTTCCTTTTTATAACTTTCCAACTGAGTCTTCTGACACATCAACTAGCAACTTCAGTCTGGAAGAAGGGGCAGATAATAGTGGTTCAGGTCCGAATTTTGATTCATCCGAGGGATATGACCGGTCTGAGGTGTCAAGCCCTTCCAATTCTATGACACGAGCAGCTATTGAGTCATCAGAGCACAAGGCTGACATTCTTAATAGTGACTTTGTTAGCCACTGGCAAAATTTGCAATTTGGGCGATTCTGTCAAACCTCACGTCATCCACCTTCAATGATGTATCCTTCACCTGTTATGGTACCTCCTGCTTATTTGCAGGGTCGTTATCCTTTGGATGGTCCGGGAAGACCTGACATGAATCTTTTTGCCCAGCTTATGAGCTATGGGCCACGAGTAGTTCCTGCGGCTCCTCTCCAGTCAGTTTCGACTAGACCTACAAATATGTACCAACGGTTTGCTGATGATATGCCTCGGTATCGAAGTGGGACTGGAACCTACCTGCCAAATCCTAAGGCTTCTGCTCGGGATCGACATCCCACAAATAACAGAAGGGCAAATTACAACTATGACAGAAATGACCATCACAGTGATAGAGAAGGAAATTGGAACATGAACCCAAAGTTGCGAGCAACTGGGCGTGGCCATAATCGAAACCAAGCTGAGAAGCTCAACTCAAAGCCAGAGAGGTTGACTAGTGAGAGCCGTGGTGAGAGACCATGGAATGCACATAGACATGACTCCTTCATTTCTCACCAGAATGGTCCAGTCCGAGCAGGTTCCTCACAGAACAACCCTGCCAATGCAGCTTACGGAATGTACTCTATACCAGGCATGAACCCTGGTGGTGTCTCATCAAGCGGACAACCAATGCCATCTGTTGTGATGTTGTACCCTTATGATCATAGCGGTGGCTACAGCCCATCAGCAGAGCAGCTTGAGTTTGGGTCTCTGGGACCAATGGGCTTCCCAGGTGTCAATGAACTTGCACACCCAAATGAGGGAAGTCATTCTGGTGAAGCACTTGAAGATCAAAGGTTTCATGGTGCCTCTGCTCAAAGAGCCTCACCAGATCAACCATCTTCTCCACATATCTCTAGGGGCCCCTGA 3990 0.4398 MEEHEGWAQPSNGLLPNGLLPNEAASVMKVLDSERWLRAEERTAELIACIQPNAPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNMKDSWAHQVRDMLESEEKNEHAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPINSLPDVSAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKFFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKKLARLLDCPEEDLHFEVNQFFLNTWDRHGSGQRPDVPSNDLCRTRLSSHDQLQRSDNLRNNDHKIDNTSNREFHIEGEHVSHSGLSQHSNISSGNSSKSTVLRTLSQRSYGIQNNSKNIDQVQRETSSNQGAHGDKGQRNVKSINSVSGVPGRFLFARTRSSPELTDSYGEVSSQGRRIKATESSKGQNSFVKLENSRRKNFEPDAAVRIDDFSARHISSHQVLGNAVHSNGTHDESGSGVTGEEFAPIAGPSGMQMMHQEEQDLLNMMTSPIPQGYSGQAHVPMNFAPGHLPFPFPPSVLASMGYAQRNMGNIPFIEAPWGANMQFPPGLVPSPLTPYFPGMGLTQSPQDLSETGNENFSSVEMNITEADNDFWHEQERGSASGVEVDNGTFEMLPDDKQQSTSSSHNFSQSSRVGSSSSSGRFQQKFSKENRGSTREEHIDNFHYQDGQRNEVYFDDRVANSELPSVPHSSSFRSKSSSESSWDGSSAKSSKSTRDRRGRKTTPPVASAVNGKGKNASEISTNRIDDENREWTSVSTMASDMSERSTGPSAGTSMHVPRHQTSGFEAAQTSGPDSPLTIAPVLLGPGSRHRAIGNSGVVPYAFYPTGPPVPFVTMVPFYNFPTESSDTSTSNFSLEEGADNSGSGPNFDSSEGYDRSEVSSPSNSMTRAAIESSEHKADILNSDFVSHWQNLQFGRFCQTSRHPPSMMYPSPVMVPPAYLQGRYPLDGPGRPDMNLFAQLMSYGPRVVPAAPLQSVSTRPTNMYQRFADDMPRYRSGTGTYLPNPKASARDRHPTNNRRANYNYDRNDHHSDREGNWNMNPKLRATGRGHNRNQAEKLNSKPERLTSESRGERPWNAHRHDSFISHQNGPVRAGSSQNNPANAAYGMYSIPGMNPGGVSSSGQPMPSVVMLYPYDHSGGYSPSAEQLEFGSLGPMGFPGVNELAHPNEGSHSGEALEDQRFHGASAQRASPDQPSSPHISRGP* 1330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1784 1329 MobiDBLite consensus disorder prediction 732 795 - -
Lja3g1784 1329 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 740 774 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 1117 1202 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 1175 1202 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 1284 1329 - -
Lja3g1784 1329 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Lja3g1784 1329 CDD NT_PAP_TUTase 59 166 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 392 411 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 878 902 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 1312 1329 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 972 1017 - -
Lja3g1784 1329 PANTHER - 1 1327 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 775 795 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 570 590 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 1137 1163 - -
Lja3g1784 1329 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1327 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 810 835 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 502 541 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 810 902 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 425 444 - -
Lja3g1784 1329 Gene3D - 162 357 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 505 539 - -
Lja3g1784 1329 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 453 490 - -
Lja3g1784 1329 MobiDBLite consensus disorder prediction 426 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1784 Lja-Chr3 20120605 20129137 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1784 - - gmx:100809742 2088.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1784 3 20120605 20129137 Lja3g1784 3 20120605 20129137 ECH
Lja3g1784 3 20120605 20129137 Lja1g0097 1 788349 794888 ECH
Lja1g0097 1 788349 794888 Lja3g1784 3 20120605 20129137 PCT