Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0097 ATGGGCGAGCATGAGAGTTGGCCGCAGCCACTGCCACCAAGTGGGTTATTGCCGAATGGCCTGTTGCCCGATGATGCCGCATCGGTGATGAGAGTGCTTGACATGGAGCGATGGTTGAAGGCTGAAGAAAGGATTGCAGAGCTAATTGCCTCCATTCAGCCTAATCCACCCTCTGAGGACCGCCGCCACGCAGTTGCTGACTATGTTCAGCGGCTCATCACCAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGCTCAGTACCCCTCAAAACTTACCTGCCTGATGGAGATATTGACTTAACTGCATTCAGTGAGAGTCAAAATGTGAAGGATGCATGGGCGCATCAAGTCCGTGACATGCTTGAGAAAGAGGAAAAGGATGAGAATGCTGAGTTTCATGTCAAGGAAGTTCAGTTCATCCAAGCTGAGGTGAAGATTATAAAGTGTCTTGTTGAGAATATTGTGGTAGACATTTCATTTAACCAGCTAGGAGGGTTGTGTACCCTTTGTTTTCTGGAGGAGGTTGATAATTTGATCAATCAAAACCATTTATTCAAGCGTAGCGTGATCCTTATAAAAGCTTGGTGTTACTATGAAAGCCGTATACTTGGTGCTCACCATGGACTTATCTCAACTTATGCATTAGAAACCTTGGTTCTTTACATATTTCACGTTTTCAACAACTCTTTTGCTGGACCACTTGAGGTATTGTATCGGTTTCTGGAGTTTTTTAGTAAGTTTGACTGGGATAATTTTTGTGTGAGCCTATGGGGTCCAGTACCCATTAGTTCGCTCCCAGATGTGACAGCTGAACCTCCGCGGAAGGACAGTGGAGATTTACTGCTCAGCAAGTTATTTCTTGATGCTTGTAGCACAGTTTATGCTGTTTTCCCCAGTAGCCAAGAAAATCAGGGGCAACCCTTTGTTTCCAAGTATTTCAATGTTATCGATCCTCTGCGTGTCAGCAATAACCTTGGGCGTAGCGTTAGTAAAGGTAATTTCTTTAGGATACGCAGTGCTTTTGCATTTGGGGCCAAAAAGCTGGCTAGACTGCTTGATTGCCCTAAGCATGAATTGTTTTTGGAAGTCAATCAGTTCTTTTTGAACACATGGGATAGACATGGAAGTGGACAACGGCCTGATGTTCCATGCAATGATTTGTGGCGCTTGAGATTATCTAGTCATGAACAAGGCTCTGAGAATCTTCAGAAAAACAATAAAAATACATATAGCAGCTCTAATTGTGTAATGCAAGTCAAAGGGCCACATACTTCACGAAGTGGTTTATCTAATAGTAGTTTGTCCTCTGAAAACTTATCTAAAAGTGATGATGTTTCTACAGTATCGAATTCTTATGCCAACCAAAATAATGTCAGGACTTCTGATCAAGTCAGAAGGGAAGCTACATGTAATGAAGGTGCTCATATTGATAAAGGTTTGAGAAATGTCAAACCCGATCGTCCATTGAGTGATGTGCCAGGAAGATTTTTATTTGCAAGAACACGTTCTAGTCCTGAGCTGACTGACACATATGGTGCAGTTGCTTCCCTTGGAAGTCGTATGACAACTCAAGAAAGTGGGAGAGGCCCAAATTCTTCTGCAAATTTGGAGAATAGCAATGGGAAGTATCTTGATCATGACATGCCAGCAGGTTATGGTGTTAGAATTGACAATGCATCTGATGGACACATTGTATCTCATCATGTTTTTGATAGTGCTGCTGATTCAAACAATGGTTTAAATATTTATGATGATGAATCAGGCTCCGGTGTTGGGGGGGAAGAGTTTGCATCTGTTTCAGGAGCAGGTGGAACACATATGATGCATCAAGAGGAACAGGATCTTTTGAACATGATGTCATCTCCCAGAGCTCAAGGTTTCACCGGTCAGGCTCGCATTCCAGTGAATTTAGCTCCAGGTCACTTCCCACTACCTTTTTCACCTTCCATTCTTGCATCCATGGGATATGCTCAGAGAAACATGGGTAACTTTCCCTTGATTGAGGCTCCGTGGGGTTCTAATATGCAATTTCCCCAAGGTTTAGTCCCTTCACCGTTGACTCCATATTTCCCTGGCATTGGGTTGCCCTCAGGTCCAGAAGATTTAATTGAAACTGGCCATGAGAATCACAGTTCTGTTGAAGCAAGCCAGGCAGAAGTTGATAATGATTTCTGGTATGAGCAAGAAAGGCCTTCTGCTAGTGGGGTTGGAGTTGTTGATGGAAATTTTGAAGTACTTCAAGATGATAAGCAACAATCAACTTCAAGTGGTTATAACTCTGCCACATCATCTCATGTTCGCAGCTCTAGTAATTCTGCTAGACTTCAGCAGGAGTTTACCACTAAGGAAAACCAAGGTTCAACAAAAGAAGAGCACATTGATTCTTCTCAATATCAATATGGAAGAGGAAATGATGTTTATTTTGATGATAGAGTAGCAAATTCTAGGTTTCCCAATGCACCATCTTCCAGCTCCTTCAGGAGTAAGACATCTTCTGAAAGCTCTTGGGAAGGATCATCAGCAAAATCCTCAAAATCAACAAGAGAAAAAAGAGGTAAGAAAAATACTCCATCAGCGCCGTCTGCTTCTTACGGGAAGGGCAAGAATGTCTTAGAAACTTCATGTAATCTAGTGGATGATGAAAATAGGCAGGGGACTGAGCCAGCTGATATGTCAGAAAGAAGCTCTGGGCCAGTTGTTGCTCCCATGCATACCCCAAGACAGCAAGTATCTGGTTATGAAGCAGCTCAGACTAGTGGCCTAGATTCTATGTTACCTCCAATGCTTATTGGCCATGGCTCTCGCCAAAGGCCCAATGATAATTCTGGGGCTGTTCCGTTTGCATTCTATCCTACAGGGCCACCAGTACCATTTGTTACTATGCTTCCATTTTATAATTTTCCTAATGAATCTTCTGACACATCAACAAGCAATTTCAATGTGGAAGAAGGGGTGGACAGCAATGATTCTAGTCAGAATTTTGATTCATCTGAGGGTCGTTCTCCTTGGGATGGTCCTGGAAGACCACCTTCAGCTAATATGAATATTTTCCCGCTTATGAGCTATGGGCCACATCTAGTACCTGTTGCTCCTCTCCATTCAGTTTCTAATAGACCACCTAATATTTACCCACGTTTTGGAGATGAGATACCACGGTATCGTAGTGGCACTGGAACCTATCTGCCAAATCCTAAGGTTTCTGTTCGAGATCGACATTCTAACAATACCAGAAGGGGTAGTTACAATTATGATAGAAGTGATCACCATGGTGACAGAGAAGGGAACTGGAATATGAACTCAAAGGTGCGAACAACTGGGCGTGGACATAATCGCATTCAAACTGAGAAGTCTAGCTCAAGGTCAAATAGGTTGGCAGCAAGTGAGAGCAACTCTGAAAGACTGTGGGGTTCACATAGACATGACTCTTTTGTTTCTCACCAGAATCGAAATGGCCCTGTTCACGTAAATTCCTCACAAAATACTTCTGCAAATGTGGCATATGGAATGTACCCTCTACCCGGCATGAACTCCGGCGGTAATGGACCAACAGTTCCATCTGTTGTAATGTTCTATCCTTATGATCATAATACTGGAACTCCGGGACATGTGGGTTTCTCAGGTAATGAGGGAAGTGAATCTGGTGGAGCATTTGAGGAGCAGAGGTTTCATGGTGGCACTCCTAAACAATGCTCACCGGATCAACCTTCTTCACCTCGTGCCCCAAGCAGGGGGCATTAA 3738 0.4345 MGEHESWPQPLPPSGLLPNGLLPDDAASVMRVLDMERWLKAEERIAELIASIQPNPPSEDRRHAVADYVQRLITKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSESQNVKDAWAHQVRDMLEKEEKDENAEFHVKEVQFIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSVILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDSGDLLLSKLFLDACSTVYAVFPSSQENQGQPFVSKYFNVIDPLRVSNNLGRSVSKGNFFRIRSAFAFGAKKLARLLDCPKHELFLEVNQFFLNTWDRHGSGQRPDVPCNDLWRLRLSSHEQGSENLQKNNKNTYSSSNCVMQVKGPHTSRSGLSNSSLSSENLSKSDDVSTVSNSYANQNNVRTSDQVRREATCNEGAHIDKGLRNVKPDRPLSDVPGRFLFARTRSSPELTDTYGAVASLGSRMTTQESGRGPNSSANLENSNGKYLDHDMPAGYGVRIDNASDGHIVSHHVFDSAADSNNGLNIYDDESGSGVGGEEFASVSGAGGTHMMHQEEQDLLNMMSSPRAQGFTGQARIPVNLAPGHFPLPFSPSILASMGYAQRNMGNFPLIEAPWGSNMQFPQGLVPSPLTPYFPGIGLPSGPEDLIETGHENHSSVEASQAEVDNDFWYEQERPSASGVGVVDGNFEVLQDDKQQSTSSGYNSATSSHVRSSSNSARLQQEFTTKENQGSTKEEHIDSSQYQYGRGNDVYFDDRVANSRFPNAPSSSSFRSKTSSESSWEGSSAKSSKSTREKRGKKNTPSAPSASYGKGKNVLETSCNLVDDENRQGTEPADMSERSSGPVVAPMHTPRQQVSGYEAAQTSGLDSMLPPMLIGHGSRQRPNDNSGAVPFAFYPTGPPVPFVTMLPFYNFPNESSDTSTSNFNVEEGVDSNDSSQNFDSSEGRSPWDGPGRPPSANMNIFPLMSYGPHLVPVAPLHSVSNRPPNIYPRFGDEIPRYRSGTGTYLPNPKVSVRDRHSNNTRRGSYNYDRSDHHGDREGNWNMNSKVRTTGRGHNRIQTEKSSSRSNRLAASESNSERLWGSHRHDSFVSHQNRNGPVHVNSSQNTSANVAYGMYPLPGMNSGGNGPTVPSVVMFYPYDHNTGTPGHVGFSGNEGSESGGAFEEQRFHGGTPKQCSPDQPSSPRAPSRGH* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0097 1245 MobiDBLite consensus disorder prediction 749 783 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 1205 1245 - -
Lja1g0097 1245 Gene3D - 164 360 - -
Lja1g0097 1245 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 999 - -
Lja1g0097 1245 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 999 1239 - -
Lja1g0097 1245 CDD NT_PAP_TUTase 61 168 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 396 463 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 1070 1096 - -
Lja1g0097 1245 PANTHER - 1 999 - -
Lja1g0097 1245 PANTHER - 999 1239 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 971 999 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 817 842 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 971 1014 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 817 916 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 1054 1136 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 1117 1132 - -
Lja1g0097 1245 SUPERFAMILY PAP/OAS1 substrate-binding domain 184 355 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 749 802 - -
Lja1g0097 1245 MobiDBLite consensus disorder prediction 856 881 - -
Lja1g0097 1245 Gene3D Beta Polymerase, domain 2 54 163 IPR043519 -
Lja1g0097 1245 SUPERFAMILY Nucleotidyltransferase 30 203 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0097 Lja-Chr1 788349 794888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0097 - - lja:Lj1g3v5034670.1 1612.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0097 1 788349 794888 Lja1g0097 1 788349 794888 ECH
Lja3g1784 3 20120605 20129137 Lja1g0097 1 788349 794888 ECH
Lja1g0097 1 788349 794888 Lja3g1784 3 20120605 20129137 PCT