Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1736 ATGGCAGAATTGATGGGATCACGGGCATACTGCTGCTTCAAGTGCCAGAACCTTGTTGCTTTCCATGATGATATCGTTTCCAAAGATTTCCAGGCAAGCAATGGCAGAGCTTTTCTGTTTTCTCATGCCATGAACATTATCTTGGGTCCTAAAGAGGATAGGCAGCTTATGACTGGTCTTCACACAGTTGCTGATGTATATTGCTCTGATTGTGGAGAGGAACTGGGATGGAAGTACGTTAAAGCTTATGAGCAAACACAGAAGTACAAAGAAGGGAAATGTGTACTAGAGAAGTTCAAGATAGTTAGGGGAAATGCCTAG 321 0.4299 MAELMGSRAYCCFKCQNLVAFHDDIVSKDFQASNGRAFLFSHAMNIILGPKEDRQLMTGLHTVADVYCSDCGEELGWKYVKAYEQTQKYKEGKCVLEKFKIVRGNA* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1736 106 ProSiteProfiles Yippee domain profile. 8 105 IPR034751 -
Lja3g1736 106 PANTHER PROTEIN YIPPEE-LIKE 3 105 - -
Lja3g1736 106 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 10 101 IPR004910 -
Lja3g1736 106 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 3 105 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1736 Lja-Chr3 19407004 19409064 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1736 - - gmx:100788878 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1736 3 19407004 19409064 Lja1g4790 1 64848088 64850520 ECH
Lja3g1736 3 19407004 19409064 Lja3g1736 3 19407004 19409064 ECH