Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1692 ATGGCAGAAGTGCAGGTACAACACCACCAAGAAGACCCAACCCTGCACCCCCAAGTCCAATATCAACATTTCCCTGGAAAAATGACCCCACAACAAGGCTACATGGACAACAAAGGCATGCCTTGGCGAAACAGAGTACCCAATGCTCCCAAACGTCAACACTGCATAGGCATCACCCTCTTCTTTCTCTTACTCGGCATCATAATCCTCATTGTCTGGCTTGCCTACAAACCCTCCAAACCCCACTTCAAAGTAGCCAGCGCCACCATCTTCGGCCTCAACACAACTTCTCCGCCATTCATGTCCATCTCCATGCAGTTCACTGTCTTCATCAGGAACCCGAACAAGCGCGTCTCCTTCTACATCGATAGGCTCTCTGCCTTCGTGTCCTACCGGAACCAACCCATCACCCCACATATTATGCTGCCGCCGCTCTACCTGGAGAAGCACAGTGCCGTGTCACTGTCGCCGGAGATTGGAGGCGTGCCGGTGCCGGTTTCGCCGGATGTGTCGAATGGGTTGGTGATGGATGAGACGTATGGAGCAGTGGGAGTGAAACTGGCGTTTCTTGGCAGGTTGAGGTGGAAGACTGGTGACATAAAATCTGCACATTATTGGTTGTATGTTAAGTGTGATCTGTTGTTGGGCTTGAAGAAAGGTGTTGTGGGTCAAGTTCCTATTCTTGGTTCTCCAGTTTGTGAGGTGGATACATGA 714 0.5098 MAEVQVQHHQEDPTLHPQVQYQHFPGKMTPQQGYMDNKGMPWRNRVPNAPKRQHCIGITLFFLLLGIIILIVWLAYKPSKPHFKVASATIFGLNTTSPPFMSISMQFTVFIRNPNKRVSFYIDRLSAFVSYRNQPITPHIMLPPLYLEKHSAVSLSPEIGGVPVPVSPDVSNGLVMDETYGAVGVKLAFLGRLRWKTGDIKSAHYWLYVKCDLLLGLKKGVVGQVPILGSPVCEVDT* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1692 237 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 26 237 - -
Lja3g1692 237 Pfam Late embryogenesis abundant protein 109 211 IPR004864 -
Lja3g1692 237 PANTHER OS05G0367900 PROTEIN 26 237 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1692 Lja-Chr3 18766885 18768343 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1692 - - var:108347136 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1692 3 18766885 18768343 Lja3g1692 3 18766885 18768343 ECH
Lja3g1692 3 18766885 18768343 Lja1g0039 1 414731 416026 ECH