Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1465 ATGGATGCTCTTCCCATACAGGAATTGGTGGAGTGGGAGTTCAAGAGTCAAGTACCTGGAAAGATGCACGCTTGTGGTCATGATGCTCACACTACCATGCTTCTTGGTGCTGCAAAAATTCTCAAACAACACGAACAAGAGATACAAGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAAGGAAGTGCAGGGGCTAAGAAAATTGTTGAATCTGGAGCATTGGAAAATGTTAGTGCTATCTTTGGACTTCATGTGGCACCTACGACTCCAGTAGGTGAATCTGGAGCATTGGAAAATGTTAGTCCTATGATGGCAGGAGCTGGTACCTTTGAAGCAAAAATAATTGGAAAGGGAGGTCATGCTGCTATTCCTCATACTTCTATTGACCCTGTTTTGGCAGCTTCTAATGTGATTGTTAGCTTACAATATCTAGTTTCTCGCGAGGCTGATCCTTTGGACTCCCAGGTTGTGACAGTTTCAAAGTTTCAAGGAGGTGATGCATTCAATGTGATTCCAGATTATGTCACAATTGGAGGAACATTTAGAGCTTTTTCCAGAGAAAGCTTGGAGCACCTGAAACAACGCATTGAGTGCAACGCGAGTGTGAGCTTTCTTGAAGAAGTGAACCCTTTATATCCTCCAACTATAAATGATGGTGACTTGCACGAGCAGTTTCGCGATGTCGCGGTGAATTTGCTCGGTGCTGATAAGGTTCACTTTGACATGCCGCTGGTCACAGCTTCTGAAGATTTTGCCTTCTATCAAGAGGCTCTTCCTGGCTACTTCTTTGTCCTTGGAATGCAGAAGGATCATCGGACTGATTCGCTGCACTCGTCGTATCTCATGATCAATGAAGAAGGGCTTCCTTATGGAGCTGCACTTCATGCATCGTTAGCTGTTAACTATCTTCAAAAATATCAGCAAGGGGAAGAGAAAATAAATGAATGGTAA 954 0.4371 MDALPIQELVEWEFKSQVPGKMHACGHDAHTTMLLGAAKILKQHEQEIQGTVVLVFQPAEEGSAGAKKIVESGALENVSAIFGLHVAPTTPVGESGALENVSPMMAGAGTFEAKIIGKGGHAAIPHTSIDPVLAASNVIVSLQYLVSREADPLDSQVVTVSKFQGGDAFNVIPDYVTIGGTFRAFSRESLEHLKQRIECNASVSFLEEVNPLYPPTINDGDLHEQFRDVAVNLLGADKVHFDMPLVTASEDFAFYQEALPGYFFVLGMQKDHRTDSLHSSYLMINEEGLPYGAALHASLAVNYLQKYQQGEEKINEW* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1465 317 TIGRFAM amidohydrolases: amidohydrolase 1 291 IPR017439 GO:0016787
Lja3g1465 317 Pfam Peptidase family M20/M25/M40 1 301 IPR002933 GO:0016787
Lja3g1465 317 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 313 IPR017439 GO:0016787
Lja3g1465 317 Gene3D - 106 213 - -
Lja3g1465 317 SUPERFAMILY Bacterial exopeptidase dimerisation domain 107 198 IPR036264 -
Lja3g1465 317 PANTHER AUXIN CONJUGATE HYDROLASE 1 313 - -
Lja3g1465 317 Pfam Peptidase dimerisation domain 107 198 IPR011650 -
Lja3g1465 317 SUPERFAMILY Zn-dependent exopeptidases 1 305 - -
Lja3g1465 317 Gene3D Zn peptidases 1 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1465 Lja-Chr3 15503235 15504607 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1465 K21604 K14664 gmx:100790664 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g5061 3 92800915 92805846 Lja3g1465 3 15503235 15504607 PCT