Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1433 ATGACACTCTCAGAGGCCAAAATAAGGGCTTTGATTGAGGAAGTAAGGGGTCTGAGATTGATAACTGCTGTGAAAACTCCATACCTCCCCAATGGCCAAATTGATCTTGATGCATATGATGACTTGGTGAACATCCAGATTGCGCACGGCATTGATGCCATTCTTGTTGGTGGAACGACCGGTGAAGGCCAATTGATGACTGTGGGTGAAAAAGTTATGCTCATCGGTCACACGGTTCACCAATTTGGCGATAAAGTGAAGGTGATTGGTAATGCCGGGAGCAACTCCACGGCACAGGCAATTAGTATCTCGGAACAGGGTTTTGCTGTTGGAATGCATGCTGCTCTTCATATTAACCCTTACTATGGCAGAACCTCGATGGATGGTTTGGTTGCTCACTATAATGCTGTGCTTGACATAGGCCCTGTGATCATATATAACATACCACAAAGGACTGCTCAGGATATTCCTCCTAGTGTGGTGGAAATCTTGGAAAAACATCCTAACCTGGTTGGTATCAAAGAGTATGGGTCTAATGAGAGGGTGAAATTGTATGCTGATAAAGGAATGGTTGTGTGGACTTCAAATGAAAAAGAATGCCATGATGGTAGGTGGGAATGTGGTGCTGTTGGGGACATGTCTGTTGTCAGCAACCTGGTTCCTAGTTTAATGAAGGAACTCATGCATGGAGGCAAGAATCCAGAATTGAATGCAAGGCTTTTGCCTTTGTTTGATTGGCTTATGCTTGAGCCAACCCCAATTGCTTTGAACACTGCTCTTATGCAACTTGGGGTTGTCAAGCCAGTTTTTAGGCTACCATTTGTGCCTCTCCCTAAGGCAAGAAGGGTGGAGTTTGTCAATTTGGTGAAGGACATGGGCAGAGAGCATTTTGTTGGGGAAAAAGATGTTCAAGTTCTTGAAGACAGTGACTTTATCATAGTTAGTCGATATTAA 954 0.4413 MTLSEAKIRALIEEVRGLRLITAVKTPYLPNGQIDLDAYDDLVNIQIAHGIDAILVGGTTGEGQLMTVGEKVMLIGHTVHQFGDKVKVIGNAGSNSTAQAISISEQGFAVGMHAALHINPYYGRTSMDGLVAHYNAVLDIGPVIIYNIPQRTAQDIPPSVVEILEKHPNLVGIKEYGSNERVKLYADKGMVVWTSNEKECHDGRWECGAVGDMSVVSNLVPSLMKELMHGGKNPELNARLLPLFDWLMLEPTPIALNTALMQLGVVKPVFRLPFVPLPKARRVEFVNLVKDMGREHFVGEKDVQVLEDSDFIIVSRY* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1433 317 Gene3D Aldolase class I 11 317 IPR013785 -
Lja3g1433 317 PANTHER DIHYDRODIPICOLINATE SYNTHASE 4 317 IPR002220 GO:0016829
Lja3g1433 317 CDD DHDPS 19 289 IPR005263 GO:0008840|GO:0009089
Lja3g1433 317 PANTHER 4-HYDROXY-TETRAHYDRODIPICOLINATE SYNTHASE 4 317 - -
Lja3g1433 317 Pfam Dihydrodipicolinate synthetase family 19 290 IPR002220 GO:0016829
Lja3g1433 317 PIRSF DHDPS 13 304 IPR002220 GO:0016829
Lja3g1433 317 SUPERFAMILY Aldolase 20 293 - -
Lja3g1433 317 ProSitePatterns Dihydrodipicolinate synthase signature 1. 53 70 IPR020624 GO:0016829
Lja3g1433 317 PRINTS Dihydrodipicolinate synthase signature 141 158 IPR002220 GO:0016829
Lja3g1433 317 PRINTS Dihydrodipicolinate synthase signature 86 104 IPR002220 GO:0016829
Lja3g1433 317 PRINTS Dihydrodipicolinate synthase signature 118 134 IPR002220 GO:0016829
Lja3g1433 317 PRINTS Dihydrodipicolinate synthase signature 50 71 IPR002220 GO:0016829
Lja3g1433 317 SMART DHDPS_2 16 293 IPR002220 GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1433 Lja-Chr3 15161969 15163668 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1433 K01714 - gmx:100806626 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g3184 1 39279092 39281928 Lja3g1433 3 15161969 15163668 PCT