Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1361 ATGGTCAACGGTGAGCTTCAAACACCAACACGTCTTGAGGGAAAATATGCTGCAATAATTGTCTGCTGGCTTCTTGGCAATGGATGTCTTTTCTCATGGAACAGTATGCTCACAATAGAAGATTACTACAAGAAGTTGTTTCCGAAATACCACCCCTCCAGGGTGCTTACTCTGGTATATCAGCCATTTGCAGTTGGAACACTTGCAATGCTGGCTTATAATGAGGCAAAAATCAACACACGAAAACGGAACCTACTTGGATACACTCTTTTTTTCATAACCACTCTGTTGGTGTTAATTTTGGATTTAGCTACATCTGGAAAAGGAGGACTTGGAACTTTCATTGGTATATGCGCAATTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCATTCAGTCTTTTCTTGCTGGCTTAGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGTTAATTACAAAAGCAGCATTTGACAGTTCTAAGGATGGTCTTCGAAAAGGAGCTATTGTATTTTTTGCCGTATCAACATTCTTTGAGCTTCTGTGCGTTCTTCTCTATGCATTTGTTTTCCCCAAACTTCCAATTGTGAAGTACTACCGATCAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTGGCATCCAGACATTACCTGAAGGCGAGGAATATGAGAAAGGACAAGAGCGGAAGGGAAACAAACAATTGTTATTGGAAAACATTGATTATGCACTTGATATATTCCTAATATATGTGCTAACCCTCTCAATTTTTCCTGGATTCCTTTCAGAAGATACAGGATCACACAGTTTGGGGTCCTGGTATGCTCTTGTTTTAATTGCAATGTATAATGTGGGGGATCTGATTGGAAGGTACATTCCACTCTTGAAATGCGTGAAGTTGGAAAACCGAAAGATGATCACGGTAGCAATTCTATGTCGTTACTTGCTTGTTCCAGCATTTTATTTCACTGCAAAGTATGGTGACCAGGGGTGGATGATAATGTTGACATCCTTCTTGGGGCTATCCAATGGTTACCTTACTGTCTGTGTTATGACATCTGCACCCAAAGGCTACAAGGGTCCAGAACAAAATGCTTTGGGAAACCTATTGGTGTTGTTTCTTCTTGGAGGTATTTTTGCAGGGGTGACACTTGACTGGCTTTGGTTAATAGGTAAAGGGTGGTGA 1248 0.4167 MVNGELQTPTRLEGKYAAIIVCWLLGNGCLFSWNSMLTIEDYYKKLFPKYHPSRVLTLVYQPFAVGTLAMLAYNEAKINTRKRNLLGYTLFFITTLLVLILDLATSGKGGLGTFIGICAISGAFGVADAHVQGGMVGDLSYMQPEFIQSFLAGLAASGALTSALRLITKAAFDSSKDGLRKGAIVFFAVSTFFELLCVLLYAFVFPKLPIVKYYRSKAASEGSKTVSADLAAGGIQTLPEGEEYEKGQERKGNKQLLLENIDYALDIFLIYVLTLSIFPGFLSEDTGSHSLGSWYALVLIAMYNVGDLIGRYIPLLKCVKLENRKMITVAILCRYLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGYLTVCVMTSAPKGYKGPEQNALGNLLVLFLLGGIFAGVTLDWLWLIGKGW* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1361 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 350 366 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 152 172 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 387 411 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 124 146 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 7 414 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 SUPERFAMILY MFS general substrate transporter 19 408 IPR036259 -
Lja3g1361 415 Pfam Nucleoside transporter 125 409 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 PIRSF ENT 7 413 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1361 415 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 7 414 IPR030200 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1361 Lja-Chr3 14236191 14240757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1361 5 413 Organic Solute Cotransporters AT4G05120 71.883 0.0 617
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1361 K15014 - gmx:100798899 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1361 3 14236191 14240757 Lja3g1360 3 14226829 14231138 PCT