Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g1360 ATGGTCAACGGTGAGGCGGGTGAGCTTCCAACACCAACACGTCTTGAGGGAAAATATGCTGCAATAATTGTCTGCTGGCTTCTTGGCAATGGATCTCTTTTCTCATGGAACAGTATGCTCACAATAGAAGACTACTATGTTTACTTGTTTCCGAAATACCACCCCTCCAGGGTGCTTAGTCTTGTATATCAGCCATTTGCAATTGGAACACTTGCTATACTGGCTTATAATGAGGCAAAAATCAATACACAAAGACGGAACCTATTTGGATACACTCTTTTTTTCATAACCACTTTGTTGGTGTTGATTTTGAATTTAGCAACATCAGGTAAAGGAGGACTTGAAACATTCATTGTTATATGTGCAATTAGTGGTGCTTTTGGAGTTGCAGATGCTCATGTTCAAGGTGGAATGGTGGGAGACCTGTCCTACATGCAACCAGAATTCCTTCAGTCTTTCCTTGCTGGCTCAGCAGCATCCGGTGCATTAACCTCTGCTTTGAGGCTAATTACAAAAGCAGCATTTGAGAATTCTAAGGATGGTCTTCGAAAAGGAGCCATTCTATTCTTTGCCATATCAACATTCTTTGAGCTTCTATGTGTTCTTCTCTATGCATCTGTTTTCCCCAAATTACCAATTGTTAAGTACTACCGATTAAAAGCAGCATCAGAAGGATCCAAAACTGTTTCAGCTGATCTTGCAGCTGGTTTAATCCAGACATTACCTGAAGGCGAGGAATATGCAAAAGAACAAAAGCGGAAGGGAATCAAGCAATTGTTATTGGAAAACATTGATTATGCACTTGATATATTCCTAATATATGTCTTAACACTGTCAATTTTCCCTGGATTCCTTTCAGAAGATACAGGATCACATAGTTTAGGGTCCTGGTATGCTCTTGTTTTAATTGCAATGTATAATGTGTGGGATCTGATTGGAAGGTACATTCCACTCTTGAAATGCTTGAAGTTGGAGAACCGAAAGATGATCACGGTAGCAATTCTATGTCGTTTCTTGCTTGTTCCTGCATTTTATTTCACTGCAAAGTATGGTGACCAGGGGTGGATGATAATGTTGACATCCTTCTTGGGGCTATCCAATGGCCACCTTACTGTCTGTGTTCTCACATCTGCACCCAAAGGTTACAAGGGTCCAGAACAAAATGCCTTGGGAAACCTATTGGTGCTGTTTCTTTTTGGAGGAATTTTTGCAGGGCTGACCCTTGACTGGCTGTGGTTAATAGGTAAAGGGTGGTGA 1257 0.4105 MVNGEAGELPTPTRLEGKYAAIIVCWLLGNGSLFSWNSMLTIEDYYVYLFPKYHPSRVLSLVYQPFAIGTLAILAYNEAKINTQRRNLFGYTLFFITTLLVLILNLATSGKGGLETFIVICAISGAFGVADAHVQGGMVGDLSYMQPEFLQSFLAGSAASGALTSALRLITKAAFENSKDGLRKGAILFFAISTFFELLCVLLYASVFPKLPIVKYYRLKAASEGSKTVSADLAAGLIQTLPEGEEYAKEQKRKGIKQLLLENIDYALDIFLIYVLTLSIFPGFLSEDTGSHSLGSWYALVLIAMYNVWDLIGRYIPLLKCLKLENRKMITVAILCRFLLVPAFYFTAKYGDQGWMIMLTSFLGLSNGHLTVCVLTSAPKGYKGPEQNALGNLLVLFLFGGIFAGLTLDWLWLIGKGW* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g1360 418 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 11 417 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1360 418 PIRSF ENT 12 416 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1360 418 Pfam Nucleoside transporter 128 412 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1360 418 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 2 11 417 IPR030200 -
Lja3g1360 418 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 274 291 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1360 418 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 330 347 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1360 418 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 127 149 IPR002259 GO:0005337|GO:0016021|GO:1901642
Lja3g1360 418 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 155 175 IPR002259 GO:0005337|GO:0016021|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g1360 Lja-Chr3 14226829 14231138 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g1360 8 416 Organic Solute Cotransporters AT4G05120 69.927 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g1360 K15014 - gmx:100798899 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g1360 3 14226829 14231138 Lja3g1360 3 14226829 14231138 ECH
Lja3g1361 3 14236191 14240757 Lja3g1360 3 14226829 14231138 PCT