Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0963 ATGGAATTGGGAAGCATAACTCACTTCCTTCAGGACAAGAATATTTTGGTCATTGGGGCCACTGGCTTCCTTGCCAAAGTCTTTGTGGAGAAGATACTTAGAGTTCAACCAAATGTGAAGAAACTTTATCTTCTTTTGAGAGCCACAGATGCCAAATCTGCCACTACAAGACTGCATAATGAGATTATAGAGAAGGACTTGTTTAGATTGTTGAAGGAAAACCTGGGTGCAAACTTCAATACATTTGTCTCTCAAAAGTTGACTTTGGTCCCTGGTGACATCTCTCAAGAGGACTTGAATTTGAAGGACTCTGTTCTACGGGAAGAGATTCGCAATCAAACTAATGTTATAATTAATTTTGCTGCCACAACTAACTTCCGTGAAAGATATGATGTTGCGTTGGGTATAAATACATTTGGAGTAAAGCATGTCTTAAGCTTCGCCAAAACTTGTACTGACTTGGAGGTTCTTGTGCATGTATCAACATCATATGTATGTGGTGAGGGGAAAGGACTCATACTAGAGGATCCATACCAATTGGGTGTGTCTCTAAATGGAATATCAGGACTAGACATTGATGTGGAAAAGAAAGTGGTGGAGGAGAAGCTGAACATGCTTCAAGAAGAGGGAGCCTCCGAAAAGGAAATTAAAATGGCCATGAGGGACTTAGGTATGGAAAGAGCAACTCAATTTGGATGGCCAAACACGTATGTTTTCACTAAGGCAATGGGAGAAATGCTTGTTGGAACTGTGAAGGAAAACATGTCTGTTGTTATTGTGCGGCCTACAATCGTTCTCAGCACTTACAGAGAACCTTTCCCAGGTTGGATTGAAGGTGTAAGAACCATTGACAATTATTTTGTTGCTTATGGTAAAGGAAAGTTAAAATGCTTCCTTGGGGACCTTGATGTAGTTTGTGACGTGATACCAGCTGACATGGTGGTGAATGCAATACTAGTAGCCATGGTGGCTCATGCAAATCATCCTTGTGATATCATATATCATGTGGGTTCCTCTGTTTCAAATCCAGTCACATACCTCAAGTTTGAAGACTACATCTACAGATATTTTACTGCAAAACCATACATAAACACAGATGGAAAGCGTGTCAAGATTGGCAAACTTACAATATTGCACAACATGGATAGCTTTCACAGATACATGTTCATTCGTTACGTGCTTCCAGCAAAGGGGCTAGAGCTGGTTAATGCAGCATTTTGCCAATATTTTGAGCACAAATGTCGTGACATAAACAGGAAGATCAAGATCGTAATGCAGTTGGTTGAAGTCTTCAAGCCTTACTGTTTCTTCAATGGCGTGTTTGATAATATGAACACAGAAAAGTTGCTGATAGCGGCAAAACAAGGTGGGGTAGAAATGGATTTGTTTTACTTTGACCCAAAAATGATTGATTGGGAAGACTACTTCATGAATATCCATTTCCCTGCTCTCGTCAAATATGCCTTCAAGTGA 1473 0.4012 MELGSITHFLQDKNILVIGATGFLAKVFVEKILRVQPNVKKLYLLLRATDAKSATTRLHNEIIEKDLFRLLKENLGANFNTFVSQKLTLVPGDISQEDLNLKDSVLREEIRNQTNVIINFAATTNFRERYDVALGINTFGVKHVLSFAKTCTDLEVLVHVSTSYVCGEGKGLILEDPYQLGVSLNGISGLDIDVEKKVVEEKLNMLQEEGASEKEIKMAMRDLGMERATQFGWPNTYVFTKAMGEMLVGTVKENMSVVIVRPTIVLSTYREPFPGWIEGVRTIDNYFVAYGKGKLKCFLGDLDVVCDVIPADMVVNAILVAMVAHANHPCDIIYHVGSSVSNPVTYLKFEDYIYRYFTAKPYINTDGKRVKIGKLTILHNMDSFHRYMFIRYVLPAKGLELVNAAFCQYFEHKCRDINRKIKIVMQLVEVFKPYCFFNGVFDNMNTEKLLIAAKQGGVEMDLFYFDPKMIDWEDYFMNIHFPALVKYAFK* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0963 490 CDD FAR-N_SDR_e 13 361 - -
Lja3g0963 490 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 337 IPR036291 -
Lja3g0963 490 PANTHER FATTY ACYL-COA REDUCTASE 2 488 - -
Lja3g0963 490 CDD FAR_C 390 489 IPR033640 -
Lja3g0963 490 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 488 IPR026055 GO:0080019
Lja3g0963 490 Pfam Male sterility protein 392 490 IPR033640 -
Lja3g0963 490 Pfam Male sterility protein 19 318 IPR013120 -
Lja3g0963 490 Gene3D - 7 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0963 Lja-Chr3 9904663 9912299 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0963 112 489 Acyl Lipid Metabolism Gene Families AT4G33790 57.937 4.21e-169 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0963 K13356 - gmx:100793197 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0963 3 9904663 9912299 Lja3g0963 3 9904663 9912299 ECH
Lja3g3603 3 71345336 71377709 Lja3g0963 3 9904663 9912299 PCT