Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0896 ATGGCATCATCACAAACCTTCTCTAGAATCTCTCTGACTCTTTTGTTGTTTTTCTTCATTTCATCACTTTGTTCCTCTTCCTATGCAACTTCTCTCTTGGCCACAACAAGAAAAACACACTATTCACCAAAACTACATGCAGAGAGGCTCATAAGAAGCCTTAACTTGTTCCCTAAGGACACAGTTAACATAAGAGTAGATGACAATAATGATGAATTTGTCCCTGGAAAGATTGTGGAGAAGAAATTCTCTTTTCTTGGTGATTCTGGTCCTTCGGTTGAAGAACTTGGTCACCATGCAGGGTACTATTCACTTCCTCATTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCACGGAACAGCAAAGATGACCCTGTTGTGATATGGTTGACTGGAGGACCAGGGTGTGGCAGTGAACTAGCATTGTTTTATGAGAATGGTCCTTTTCATATTACCAGCAACTTGTCTCTGGTGTGGAATGACTATGGCTGGGACAAGGCATCAAATATTTTATTTATTGACCAGCCTACCGGAACAGGTTTCAGCTACACTACAGATGGTTCTGATATTCGCAGTGATGAAAATGGTGTTAGCACTGATTTGTATGACTTCTTGCAGGGGTTTTTCAGGGCACATCCTCAGTTTGTTAAGAATGACTTTTACATTACTGGAGAATCATACGCTGGACACTACATTCCAGCTCTTGCATCCAGAGTTCATCAAGGAAACAAAGAAGAACAAGGAATTCACATAAACCTCAAGGGTTTTGCTATTGGTAATGGGTTAACCAATCCTGCCATTCAGTACCCAGCATACCCAGATTTTGCATTAGACAGCGGAATAATTACAAAGTCTGATTACAAACAAATCATCCAGCAAATCCCAGATTGTCTGCAAAAACTGGAAACTTGCAACACTGAAGGCGTAGATTGCTACTTTGCGTTCGATGCTTGTCAGGGAATATTCGAAGATATCATGTTCGATAATGTGGGCATCAATTACTATGACATCAGAAAGAGATGTGATGTGCCTATGTGCTATGACTTCTCAAACATGGAGAACCTTCTGAATGAGAAGACAGTGAGAGATGCTTTAGGTGTAGGAGACTTGGAGTTTGTTTCATGCAGTAGGAGAGTGCATGCTGCTATGTTAGACGACTGGGTGCAGAACTTGGAAGTTGGTATTCCTTCTCTTCTTGAGGATGGAATCAAGGTTCTTGTGTATGCTGGTGAATATGACCTCATATGCAATTGGCTTGGGAATTTAAGGTGGGTTCGTGCCATGGAGTGGTCAGGCCAAAAGGAGTTTAATGCATCCTTTACAAGGAAATTCATGGTTGATGGTGGTGAAGCAGGGTCTTTAAATAGCTATGGACCACTCTCTTTTCTCAAGGTGAAGGATGCTGGACACTTGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTGACAAGGTGGATGGGAGGGAAACTTTGA 1485 0.4182 MASSQTFSRISLTLLLFFFISSLCSSSYATSLLATTRKTHYSPKLHAERLIRSLNLFPKDTVNIRVDDNNDEFVPGKIVEKKFSFLGDSGPSVEELGHHAGYYSLPHSKAARMFYFFFESRNSKDDPVVIWLTGGPGCGSELALFYENGPFHITSNLSLVWNDYGWDKASNILFIDQPTGTGFSYTTDGSDIRSDENGVSTDLYDFLQGFFRAHPQFVKNDFYITGESYAGHYIPALASRVHQGNKEEQGIHINLKGFAIGNGLTNPAIQYPAYPDFALDSGIITKSDYKQIIQQIPDCLQKLETCNTEGVDCYFAFDACQGIFEDIMFDNVGINYYDIRKRCDVPMCYDFSNMENLLNEKTVRDALGVGDLEFVSCSRRVHAAMLDDWVQNLEVGIPSLLEDGIKVLVYAGEYDLICNWLGNLRWVRAMEWSGQKEFNASFTRKFMVDGGEAGSLNSYGPLSFLKVKDAGHLVPMDQPKAALEMLTRWMGGKL* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0896 494 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 39 492 IPR001563 GO:0004185|GO:0006508
Lja3g0896 494 SUPERFAMILY alpha/beta-Hydrolases 97 493 IPR029058 -
Lja3g0896 494 Gene3D alpha/beta hydrolase 78 493 IPR029058 -
Lja3g0896 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 162 174 IPR001563 GO:0004185|GO:0006508
Lja3g0896 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 185 IPR001563 GO:0004185|GO:0006508
Lja3g0896 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 462 475 IPR001563 GO:0004185|GO:0006508
Lja3g0896 494 PRINTS Carboxypeptidase C serine protease (S10) family signature 210 235 IPR001563 GO:0004185|GO:0006508
Lja3g0896 494 Pfam Serine carboxypeptidase 96 491 IPR001563 GO:0004185|GO:0006508
Lja3g0896 494 ProSitePatterns Serine carboxypeptidases, histidine active site. 462 479 IPR033124 GO:0004185
Lja3g0896 494 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 39 492 - -
Lja3g0896 494 ProSitePatterns Serine carboxypeptidases, serine active site. 224 231 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0896 Lja-Chr3 9124558 9127582 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0896 K16298 - gmx:100798795 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0896 3 9124558 9127582 Lja3g0896 3 9124558 9127582 ECH
Lja3g0896 3 9124558 9127582 Lja3g3671 3 72867512 72871391 PCT