Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0895 ATGGCATCATCACAAACCTTCTCTGAATTCTCTCTGACTCTTTTGTTGTTCTTTTTCATTTTATCACTTTCTTCTTCTTCTTATGCTACTTCTCGCTTTGCCACCACAGCAAGAACAACAACAACAAAAACACACTACTCACCAAAACTACAAGCAGAAAGGCTCATTCGAAGCCTTAACTTGTTCCCTAAGGACCCAGTTAACATAAGATTAGATAGCATTAACAATGATGAATTTGTCCCTGGGAAGATTGTGGAGAAGAAGTTCTCTTTTCTTGGTGATTCTGGTCCTTCTGTTGAAGAACTTGGTCACCATGCTGGGTACTATTCACTTCCTCATTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCCCGGAACAGTACAGATGACCCTGTTGTGATATGGTTGACTGGAGGACCTGGGTGTAGCAGTTCACTAGCTTTGTTCTATGAGAATGGTCCTTTTAAAATTAACAGCGACTTATCTCTTGTGTGGAATGACTATGGTTGGGACAAGGCATCAAATATTTTATTTGTTGACCAACCCACTGGGACTGGTTTCAGCTACACTACAGATGATGCTGATATTCGCCAAGATGAAGATGGTGTTAGCAATGATTTGTATGACTTCTTGCAGGAGTTTTTCAAGGCACATCCTGAGTTTGCCAAAAATGATTTTTATATTACTGGAGAATCATACGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCAACAAGGAAATAAACAAAAGGAAGGAAATCATATAAATCTCAAGGGGGTTGCTATTGGTAATGGTTTAACCGACCCTGGGATTCAGTACGCATCATACCCAGATTTTGCATTTGAGAATAAATTAATAACAGAGGCTGACAAAGAAGATATCAGCAAGAGTATCCCTAATTGTCAGCAGGCCGCGGATACATGCAACACTGAAGGTGGGGAAAGTTGTGATTCCGCGGCCAGTGTTTGTGAAGACATATTCAATAGTATCCTATCCATTACTGGAGACATCAATTACTATGATATTAGAAAGAAATGTGAAGGGCCACTATGCTATGACTTCTCAAACGTTGAGAATCTTATGAATGAAAAGAGTGTGAGGGATGCTTTAGGTGTCGGAGACTTGGAGTTTGTTTCATGCAGTAGTAGAGTGCATAGTGCTTTGGCGCAGGACTTGATGAAGGACTATGAAGTGGATATTCCTGCTCTTCTTGAGGATGGAATCAAGGTGCTTCTGTATGCTGGGGAATTTGATCTCATCTGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGAAGTGGGCAGGCCAAAAGCAGTTTGGGGCATCCCCTACAGTGAAATTCATGGTTGATGATGCTGAAGCAGGGTCTTTAAATAGCTATGGACCACTCTCTTTTCTCAAGGTGAATGGTGCTGGACACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGGGATGCTGACAAAGTGGATGGGAGGGCAATTCTGA 1506 0.419 MASSQTFSEFSLTLLLFFFILSLSSSSYATSRFATTARTTTTKTHYSPKLQAERLIRSLNLFPKDPVNIRLDSINNDEFVPGKIVEKKFSFLGDSGPSVEELGHHAGYYSLPHSKAARMFYFFFESRNSTDDPVVIWLTGGPGCSSSLALFYENGPFKINSDLSLVWNDYGWDKASNILFVDQPTGTGFSYTTDDADIRQDEDGVSNDLYDFLQEFFKAHPEFAKNDFYITGESYAGHYIPALASRVQQGNKQKEGNHINLKGVAIGNGLTDPGIQYASYPDFAFENKLITEADKEDISKSIPNCQQAADTCNTEGGESCDSAASVCEDIFNSILSITGDINYYDIRKKCEGPLCYDFSNVENLMNEKSVRDALGVGDLEFVSCSSRVHSALAQDLMKDYEVDIPALLEDGIKVLLYAGEFDLICNWLGNSRWVHAMKWAGQKQFGASPTVKFMVDDAEAGSLNSYGPLSFLKVNGAGHMVPMDQPKAALGMLTKWMGGQF* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0895 501 ProSitePatterns Serine carboxypeptidases, serine active site. 230 237 IPR018202 GO:0004185
Lja3g0895 501 Gene3D alpha/beta hydrolase 84 500 IPR029058 -
Lja3g0895 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 191 IPR001563 GO:0004185|GO:0006508
Lja3g0895 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 469 482 IPR001563 GO:0004185|GO:0006508
Lja3g0895 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 180 IPR001563 GO:0004185|GO:0006508
Lja3g0895 501 PRINTS Carboxypeptidase C serine protease (S10) family signature 216 241 IPR001563 GO:0004185|GO:0006508
Lja3g0895 501 Pfam Serine carboxypeptidase 102 498 IPR001563 GO:0004185|GO:0006508
Lja3g0895 501 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 44 499 IPR001563 GO:0004185|GO:0006508
Lja3g0895 501 SUPERFAMILY alpha/beta-Hydrolases 103 500 IPR029058 -
Lja3g0895 501 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 44 499 - -
Lja3g0895 501 ProSitePatterns Serine carboxypeptidases, histidine active site. 469 486 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0895 Lja-Chr3 9108873 9113449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0895 K16298 - gmx:100798795 714.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3671 3 72867512 72871391 Lja3g0895 3 9108873 9113449 PCT