Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0765 ATGGAGTTCCTCTCATTAATCTACACCATTCCAGCTTTCTACATCTTTTGCCTGATCTGGAGGTTGTTCAATCAGAGAAGGAACCAAGAATGCTACATACTAGACTACCAATGTTACAAGCCAACCGATGACAGAATGCTGGGAACAGAGTTCTGTGGTAAAGTCATCAGAAGAACAGAGAATCTTGGTCTCAACGAGTACAAGTTCCTCCTCAAAGCCATCGTGAGCTCCGGCATAGGTGAACAAACCTACGCGCCAAGAAACGTTTTCGATGGCCGCGAAGCGAGTCCAACATTGGAAGATGGAATCTTAGAGATGGAGGAGTTTTTCAACGACAGCATAGCAAAGCTTCTTCAAAGAACATCAATTTCACCCTCTGAAATCGATGTTCTTGTAGTGAATATCTCCATGTTTGCGGCGGTTCCTTCTCTATCTTCTCGCATCATCAACCGCTACAAATTGAGGCACGACATCAAGGTTTACAATCTCACTGGCATGGGATGCAGTGCTAGCTTGATTTCTGTGGACATTGTGCAGAACATTTTCAAAACCCAGAAGAACAAGTTGGCTCTGTTGGTGACTTCAGAGTCTCTCAGTCCGAATTGGTATAATGGGAATGACAGATCAATGATCCTTGCAAATTGTCTCTTCCGCTCTGGTGGGTGTGCTATGATCTTGACAAACAAGAGATCCTTGAAGGAAAAAGCCATGTTGAAGTTGAAATGCTTGGTGAGGACCCATCATGGTGCAAGAGAAGAGTCTTTCAGTTGCTGCGTTCAGAAGGAAGATGAACAGGGGAGGCTTGGTTTTCATCTTGGGAAAACTCTCCCAAAAGCAGCAACAAGGGCTTTTGTCGATAATTTAAGAGTTATGGCACCGAAAATTCTCCCATCAAGGGAGTTGTTAAGGTTTCTTGTTATCTCCCTCATCAAGAAATTGAAGATCACCAGTTCCACTAAGTCTTCTAGTGGTGGAGCTACTAAATTTACTAAATCACCATTGAATTTCAAAACTGGGGTTGATCATTTTTGCATTCACACAGGAGGGAAAGCTGTGATTGATGGAATTGGAATGAGCTTGGATCTGACTGAGCATGATCTTGAGCCTGCAAGGATGACACTCCACCGTTTTGGTAACACTTCAGCTAGCAGCCTCTGGTATGTGCTTGGGTACATGGAGGCAAAAAAGAGGCTCAAGAGGGGTGATAGGATTTTCATGATTAGCTTTGGTGCAGGGTTCAAATGCAACAGCTGTTTGTGGGAGGTGATGAGGGATCTAGGGGATGCAAATGTTTGGGATGGTTGCATTGATGATTATCCACCAGAGTCACTGGCCAACCCTTTCATGGAGAAGTATGGTTGGATCAATGATGTTGAGGATGAAAACAGCATTGAACTCCCAGATTTTCTCAAGTGA 1416 0.4393 MEFLSLIYTIPAFYIFCLIWRLFNQRRNQECYILDYQCYKPTDDRMLGTEFCGKVIRRTENLGLNEYKFLLKAIVSSGIGEQTYAPRNVFDGREASPTLEDGILEMEEFFNDSIAKLLQRTSISPSEIDVLVVNISMFAAVPSLSSRIINRYKLRHDIKVYNLTGMGCSASLISVDIVQNIFKTQKNKLALLVTSESLSPNWYNGNDRSMILANCLFRSGGCAMILTNKRSLKEKAMLKLKCLVRTHHGAREESFSCCVQKEDEQGRLGFHLGKTLPKAATRAFVDNLRVMAPKILPSRELLRFLVISLIKKLKITSSTKSSSGGATKFTKSPLNFKTGVDHFCIHTGGKAVIDGIGMSLDLTEHDLEPARMTLHRFGNTSASSLWYVLGYMEAKKRLKRGDRIFMISFGAGFKCNSCLWEVMRDLGDANVWDGCIDDYPPESLANPFMEKYGWINDVEDENSIELPDFLK* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0765 471 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 454 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lja3g0765 471 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Lja3g0765 471 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 421 IPR013747 -
Lja3g0765 471 SUPERFAMILY Thiolase-like 243 423 IPR016039 GO:0016746
Lja3g0765 471 PANTHER 3-KETOACYL-COA SYNTHASE 1 461 IPR012392 GO:0006633|GO:0016020|GO:0016747
Lja3g0765 471 PANTHER 3-KETOACYL-COA SYNTHASE 1 461 - -
Lja3g0765 471 Gene3D - 71 422 IPR016039 GO:0016746
Lja3g0765 471 CDD CHS_like 17 420 - -
Lja3g0765 471 SUPERFAMILY Thiolase-like 17 231 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0765 Lja-Chr3 7738704 7740809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0765 19 468 Acyl Lipid Metabolism Gene Families AT2G28630 69.935 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0765 K15397 - gmx:100809149 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0765 3 7738704 7740809 Lja3g0765 3 7738704 7740809 ECH
Lja3g0765 3 7738704 7740809 Lja3g2820 3 42881935 42883990 ECH
Lja3g2820 3 42881935 42883990 Lja3g0765 3 7738704 7740809 PCT