Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0735 ATGTGCAAATCATCACTTTACTTCAACAAAGCTATGTTGCATCAAGCATGCCTCGCTTCTGCATTCAGAACATCCCTGGCCTGCACCATAGTTGGCTTGACCACCCTCTTCGGCCCAACCCCCATTAACGACATCATAGCCTTCCCTGCACTATCCTACCTCACCGCCATCCTCATCATCAGAGACGCCACTCTCGGAGAGACTCTTCGCGGTTGCTGGCTCGCGCTCTGCGCCACCATTCAGAGCACTGTCCCCGCCATGTTAAGTTTCTGGTGCATTGGCCCTGCAGCCAAGTTCTTCTCCGAGGGAACCACAGTTTTTGCGGTGGCGCTCGCCGCGTTCGTGGTGGTGCTCCCGGCGGAGTCCACCACCCACTTGATGGCTAAACGGTTAGCGTTGGGTCAGATAGTGGTGTTGTATGTTGTTGCTTACGTGAGAGAGGAAGTTCGTAGGGAACTTCTCATGCACCCTCTTCGGGTCGCAGCTAGCACTGCCCTTGGAGTCTTGGCTTGTGTTCTGGCAATGTTGTTTCCATATCCACGTCTTGCTTATCATCAGGTGAAAAAGAATTACAGGCTACTAACAAATAATACTTCAAAAAGGCTAAAGCTTTTGATGAAGGCAATATGTGAACAGAAAAAGGATTTGGCACTCACATCAATCTCCCATGCTAAGTCATTGGCCACTTCACGGAACAAACTCCTCCAAATCCTCACAAACCACCAAAATGGCATGAGGTGGGAAATACCTCCAATTAAATCTTTTAAATCCTATCACTTCAACCCGGAAGACCAGAGACTTCAAGATATAGATACCACCATCAAAGGGATGGAATTGGCTCTAACAAGCATCATTTCATTTCCTGTCAGCATACTCAATGAAGACATGAAACATGGCCTGAATAGTCTAGTGAAACATGTTAGCCTCACCATAAAACAAACCACACACAATTCACATGGTGCTTCACTAACTGCTCCTGAACATAGTGAAAAAAACATAACTAACTTTCTCCAATCCCTTCAAACCATCCCAACAACCCAAGATTTACCCTTTTACTTCTACTTATTTTGTGCCAAAATCCTCCAAAGGATCTCATATGCTGAAGCTTCAACTAGTATTCAAGAAAAAGAGGAAAACTCTATAGAGTCTCAAAATTGGGCTAAACTTTTAACAAGCCCAAAACTAATGGAATCAATGAAATGCTCTCTAACACTGGGCCTTGCAGTGTTGCTGGGCTTACTCTACAGCAAAGAGAATGGGTTTTGGGCCGCAATACCTGTAGCCGTGACCTTTTGCCCGGGCAGAGAAGCCACATTCAGAGTAGCAAATATAAAAGCCCAAGGAACTGTGTTAGGAACAGTATATGGAGCCTTATGCTGTTTTGTCTTTGAGAAATTTTTGTCACTGAGATTCATGTTTCTTATTCCATGGCTCATTTTCACCACTGTGCTTCAACAAAGCAAAATGTATGGTGCAGCTGGTGGGATGTCAGCACAGATTGGAGCTATTCTGATATTGGGTAGGAAAAATTTTGGGCCACCCAGTGAATTTGCTATAGCAAGAATCATTGAAACCTTCATTGGGTTAACTTGTTCTGTTTTGGTGCACCTTCTCTTCATGCCCAAAAGAGCTTCTACTTGTGCGAAATCTGAGCTTTCTTTTTGTTTGGGAACCCTTGTTGAGTCCATTAATTCCTTGAGTCTAGCAAGCAAAAGTGACTTAGAAGAAAGTCATGGGAAGTTAAAGATACAAATTATGGAGCTCAAAAAATTTGTTGTGGAAGCAGAGTTGGAGCCCTGTTTTTGGTTCTTACCTTTTCATGGTGCTTGTTATAATAAGCTTATGGGGTCTTTATCCATTTTGGATAACACATTGCAAGTTGGAGCTTATGCTTTGAAGTTCCTAAAACATGAGTTTCGAAGAAGTGAAGCCTCTTGGAGAGAGCATGTGAGTGTTCTAGAAGGTGAAATTGGATACTTTAAGGAACATGTTTCCTCCAAAGTTAAAGTTTTTGAGCAAATAACAAGGATGAAATCGTTTGGGTTTCTTGAGAAGGAGCTTGAGAAGAACAGCATTACTTGTAATTGTGACATTGAAATGGGAAGGTCAGCAAAGTCTGGTATATGCATGTTTTCTTCTGGTTTAGGCCATGGTGATGTTGCTGAAGAAGTCATAGGCTCTTATCTCCAATGCTCAAGAAATGTTAGCGATGTTGTTCTGTGTTTGAGTGCTCTCGGGTTTTGCTTGAGTGTTCTCGTAAGAGAGATTATGGAAATTGAAGAAGCAATCAGGGAACTTGCTTTGACAATGGCAACGGATTCTTCTAATGGAGACCATCAGAAAGCAGGAAAGCAACCTCCTTTGCCATCTCCCTTGCGTTTCTCCAAGTTCTTTCAGGCCAATATGAGAATTCTGGTTACTGGAGGAGCTGGATTTATTGGCTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTTCTTCACTGGATCAAAAGACAACCTTAAGAAATGGATTGGTCATCCAAGATTTGAGCTGATTCGTCATGATGTCACAGAGCAACTGCTGGTTGAGGTTGATCAAATCTACCATCTTGCATGCCCAGCATCTCCAATTTTCTACAAATACAATCCTGTAAAGACAATAAAGACGAATGTGATTGGAACATTGAACATGCTTGGTCTCGCCAAGCGTGTGGGAGCAAGGATTTTGCTCACATCGACTTCTGAAGTATATGGGGACCCTCTTATCCATCCACAACCTGAAAGCTATTGGGGCAATGTTAACCCTATCGGAGTTCGGAGTTGTTATGACGAGGGCAAGCGTGTGGCAGAAACTTTGATGTTTGATTATCACAGGCAGCATGGAATAGAAATACGCATTGCAAGAATCTTTAATACATATGGACCACGCATGAATATTGATGATGGGCGTGTTGTCAGCAATTTCATTGCTCAAGCAATTCGCGGTGAACCCCTAACAGTCCAAGTTCCAGGAACTCAAACTCGCAGTTTCTGCTATGTCTCTGATATGGTTGATGGCCTTATTCGTCTAATGGAAGGGGAAAACACTGGTCCAATCAACATCGGGAACCCAGGTGAGTTTACAATGATTGAGCTTGCAGAGAATGTGAAAGAGCTTATTAATTCAACAGTGGAGATAAAGATGATTGAGAACACTCCCGATGATCCTCGTCAGAGAAAACCAGACATAGCAAAAGCAAAGGAGTTGCTAGGCTGGGAACCAAAGGTCAAGTTGCGCGACGGCCTTCCTCTAATGGAAGAGGATTTCCGTCTCAGGCTCGGGGTTCTTGCAATGGCGGCGAATCCTTCTAATGGAGATCAACAAACAACACCTTCTAAGCAACCTCCCTTGCCATCTCCCTTGCGTTTCTCCAAATTCTTTCAGTCGAACATGAGAATCTTGATTACTGGTGGGGCTGGATTCATTGGTTCTCACCTAGTCGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTACTTCACTGGGTCAAGAGACAACCTCAAAAAATGGATTGGCCATCCAAGATTTGAACTTATCCGCCATGATGTCACTGAGACTTTGATGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCTGCGTCTCCTATTTTTTACAAATATAATCCTGTGAAGACAATTAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGAGCAAGGATTTTGCTTACATCAACTTCAGAGGTTTATGGGGATCCTCTTATACATCCCCAGCCTGAAAGCTATTGGGGCAATGTTAACCCCATCGGAGTTCGTAGTTGTTATGATGAGGGAAAGCGTGTCGCTGAGACTTTGATGTTTGATTATCATAGGCAACATGGAATAGAAATACGCATTGCAAGAATCTTTAACACATATGGTCCACGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCAATTCGTAATGAACCCTTGACGGTCCAATCTCCAGGAACACAAACTCGCAGTTTCTGCTATGTCTCTGATCTGGTTGATGGCCTTATCCGTCTCATGGATGGATCAGACACTGGACCAATCAACCTTGGAAACCCAGGTGAATTTACAATGCTTGAACTTGCTGAGACAGTGAAGGAGCTTATTAATCCAAATGTGGAGATAAAGATAGTGGAGAACACTCCTGATGATCCGAGGCAGAGAAAACCAATCATAACCAAAGCAAAGGAATTGCTTGGCTGGGAACCAAAGGTGAAACTGAGGGATGGCCTTCCTTTCATGGAAGAAGATTTCCGTTTGAGGCTTGGGGTTGAGAAAAATTAA 4380 0.4315 MCKSSLYFNKAMLHQACLASAFRTSLACTIVGLTTLFGPTPINDIIAFPALSYLTAILIIRDATLGETLRGCWLALCATIQSTVPAMLSFWCIGPAAKFFSEGTTVFAVALAAFVVVLPAESTTHLMAKRLALGQIVVLYVVAYVREEVRRELLMHPLRVAASTALGVLACVLAMLFPYPRLAYHQVKKNYRLLTNNTSKRLKLLMKAICEQKKDLALTSISHAKSLATSRNKLLQILTNHQNGMRWEIPPIKSFKSYHFNPEDQRLQDIDTTIKGMELALTSIISFPVSILNEDMKHGLNSLVKHVSLTIKQTTHNSHGASLTAPEHSEKNITNFLQSLQTIPTTQDLPFYFYLFCAKILQRISYAEASTSIQEKEENSIESQNWAKLLTSPKLMESMKCSLTLGLAVLLGLLYSKENGFWAAIPVAVTFCPGREATFRVANIKAQGTVLGTVYGALCCFVFEKFLSLRFMFLIPWLIFTTVLQQSKMYGAAGGMSAQIGAILILGRKNFGPPSEFAIARIIETFIGLTCSVLVHLLFMPKRASTCAKSELSFCLGTLVESINSLSLASKSDLEESHGKLKIQIMELKKFVVEAELEPCFWFLPFHGACYNKLMGSLSILDNTLQVGAYALKFLKHEFRRSEASWREHVSVLEGEIGYFKEHVSSKVKVFEQITRMKSFGFLEKELEKNSITCNCDIEMGRSAKSGICMFSSGLGHGDVAEEVIGSYLQCSRNVSDVVLCLSALGFCLSVLVREIMEIEEAIRELALTMATDSSNGDHQKAGKQPPLPSPLRFSKFFQANMRILVTGGAGFIGSHLVDRLMENEKNEVIVADNFFTGSKDNLKKWIGHPRFELIRHDVTEQLLVEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQVPGTQTRSFCYVSDMVDGLIRLMEGENTGPINIGNPGEFTMIELAENVKELINSTVEIKMIENTPDDPRQRKPDIAKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVLAMAANPSNGDQQTTPSKQPPLPSPLRFSKFFQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSRDNLKKWIGHPRFELIRHDVTETLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRNEPLTVQSPGTQTRSFCYVSDLVDGLIRLMDGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKIVENTPDDPRQRKPIITKAKELLGWEPKVKLRDGLPFMEEDFRLRLGVEKN* 1460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0735 1459 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 770 1111 IPR044516 GO:0042732|GO:0048040|GO:0070403
Lja3g0735 1459 CDD UGD_SDR_e 802 1106 - -
Lja3g0735 1459 Pfam Fusaric acid resistance protein-like 407 535 - -
Lja3g0735 1459 CDD UGD_SDR_e 1147 1451 - -
Lja3g0735 1459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1142 1451 IPR036291 -
Lja3g0735 1459 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1114 1459 - -
Lja3g0735 1459 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 770 1111 - -
Lja3g0735 1459 Gene3D - 930 1109 - -
Lja3g0735 1459 Gene3D - 799 929 - -
Lja3g0735 1459 Gene3D - 1276 1454 - -
Lja3g0735 1459 Gene3D - 1144 1275 - -
Lja3g0735 1459 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 797 1106 IPR036291 -
Lja3g0735 1459 Pfam GDP-mannose 4,6 dehydratase 1150 1443 IPR016040 -
Lja3g0735 1459 Pfam GDP-mannose 4,6 dehydratase 805 1099 IPR016040 -
Lja3g0735 1459 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1114 1459 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0735 Lja-Chr3 7427335 7462127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0735 1105 1443 Miscellaneous Gene Families AT4G00110 23.138 5.13e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0735 - - adu:107476862 840.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0735 3 7427335 7462127 Lja3g0735 3 7427335 7462127 ECH
Lja3g0735 3 7427335 7462127 Lja3g2790 3 42096545 42101510 ECH
Lja3g2790 3 42096545 42101510 Lja3g0735 3 7427335 7462127 PCT