Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g0634 ATGGGGGTAGTTCGAGTTCCATTCCTGCCACTAACGGCGCTGTTAGTGTTACTCCTCACCGTCACCTCCACCGTCCACTCATGCCCGCCGTCCGATCTGGCTGCCCTTCATGCCTTCAGGTCATCCCTCCGTGAGCCTCATAACGGCGTGCTCAACTCTTGGACTGGCACCGACTGCTGCGCCAACTGGTTCGGCATCGCCTGCGACAAGAACACCCGCCATGTCTCTGAAATCAACCTCCGCGCCGGCTCCGTCGACACCACCTTCGAGCAAGCCCACGAGCCCGCCTACATGGCCGGCCACATCTCCCCGGAGATCTGCAAGCTCACTCAGCTCTCTAGCCTCACCATCACCGACTGGCAGGGAATCTCCGGCGAGATCCCCGGATGTCTCACCCGGCTGAGCATCGCCGACAACCTTATTGCCGGAAATATCCCGCCGTCGCTAACCTACGCCACCAGGCTCACGCATATCGACCTCCGCAACAATAAGATCTCCGGGCCCATTCCGCAAAGCCTGGGGCGGCTTCGGATGTTGAGCCACGTTGGGCTCAGCGGGAACCAGTTAACCGGGCCCATCCCAAGCTCAATTTCAGAGATTCCCCGTCTCGCGGATTTAGATCTGTCTCAAAACCAGCTATCCGGTCCAATTCCAGAGCCGTTGGGCCGGATGGCAGTTTTATCGACACTAAAATTCGATATGAACAAGCTCTCGGGTACGATCCCTGCAAGCTTGTTGGTCTCGGAGATTAGTGACTTGAACTTGAGCCATAACATGTTGGAGGGTGAGATACCCAACGCTTTTGGGGCCAAGACTTATTTCACGTCAATGGATTTTTCCTACAATAATCTCAAGGGTCCTATACCCAAATCCATATCTTCTTCTTCCTACATTGGGTACTTGGACTTTAGCCACAACCATCTCTGCGGCCCAATTCCCAGTGGAGATTACTTGGATCATGTTGATGCAGCAGTTTTTGTCATGTCACTAGTAGTGACCCTTCTAGTGGCTCTTGATCCCACACTTGTTGAGTCATGTCCTCCTTCTGAATGGGCATCACTCATGGCCTTCAAAGCAGCTCTCCAACAACCCAACTTTGAAATCTTCCATTCATGGAGAGGCACTAACTGCTGCTACCACTGGTACGGCATCAGCTGCGACCCCACCACCCGCCGCGTCGCGGAGATCACCCTCCGCGGCCTCACTGTCTCCGACGACTACAACCACCACCGCCTCCCCCGCCGCCGCAACAATAACAGTGCAGGATACATGACCGGATACATCTCCCCATCAATCTGCAACCTCACGCAGCTCTCCAGCATTACAATCTCCGACTGGAAGGGCATTTCAGGAACTATCCCTGGCTGCATCACCACCCTCCGTTCTCTCCAAACCATAGACCTCTCCGGGAACCTCATCACAGGGAAGATTCCGTGGGACATAGGGAGCCTCACGCAGCTCACCGTGCTCAACCTCGCAGACAATCACATCTCTGGATGGATCCCAAAGACGCTGGTGAACCTCTCCAACCTCATGCAACTGGATCTTCGGAACAACGCAATAAAGGGCCCGATTCCGTGGAACATGGGCCAGCTCAGAAAGCTGAACCGGGCCTTGTTAGGCCACAACCGGATAACCGGTTCAATTCCAAGGTCGATTGCCAGCATTTACTCGTTGGCGGACATCGACCTTTCTCTGAACCGGTTATCCGGTTGGATTCCGGCCTCATTAGGTCGGATGCCGGTCCTAGACTCGCTGAACCTGAAGTACAACAACTTGACGGGGAGGATTCCGGGGACCCTGCTGGCTTCTAGAATGAGTCGTTTGGATCTGAGCTGGAATGCATTGAGTGGACACATTCCAGATGTGTTCGGAACAAACACTTATTTTTTAAACCTTGATTTGTCGCACAACTTCTTGAGCGGTTTCGTTGCGAAATCTATGGCGTTTGCATGGTACATTGGCTATGCGGATTTGAGTCATAATCGTTTGTGTGGCCAGATTCCACGTGGACCTTCTTTCGATCATCTTCCACCACGAGCATTTCAGCACAATCAATGTCTCTGTGGCATGCCGCTTAAACCATGCGTTCATCGTAGTTCACACACGTGA 2112 0.5355 MGVVRVPFLPLTALLVLLLTVTSTVHSCPPSDLAALHAFRSSLREPHNGVLNSWTGTDCCANWFGIACDKNTRHVSEINLRAGSVDTTFEQAHEPAYMAGHISPEICKLTQLSSLTITDWQGISGEIPGCLTRLSIADNLIAGNIPPSLTYATRLTHIDLRNNKISGPIPQSLGRLRMLSHVGLSGNQLTGPIPSSISEIPRLADLDLSQNQLSGPIPEPLGRMAVLSTLKFDMNKLSGTIPASLLVSEISDLNLSHNMLEGEIPNAFGAKTYFTSMDFSYNNLKGPIPKSISSSSYIGYLDFSHNHLCGPIPSGDYLDHVDAAVFVMSLVVTLLVALDPTLVESCPPSEWASLMAFKAALQQPNFEIFHSWRGTNCCYHWYGISCDPTTRRVAEITLRGLTVSDDYNHHRLPRRRNNNSAGYMTGYISPSICNLTQLSSITISDWKGISGTIPGCITTLRSLQTIDLSGNLITGKIPWDIGSLTQLTVLNLADNHISGWIPKTLVNLSNLMQLDLRNNAIKGPIPWNMGQLRKLNRALLGHNRITGSIPRSIASIYSLADIDLSLNRLSGWIPASLGRMPVLDSLNLKYNNLTGRIPGTLLASRMSRLDLSWNALSGHIPDVFGTNTYFLNLDLSHNFLSGFVAKSMAFAWYIGYADLSHNRLCGQIPRGPSFDHLPPRAFQHNQCLCGMPLKPCVHRSSHT* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g0634 703 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 131 327 - -
Lja3g0634 703 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 131 327 - -
Lja3g0634 703 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 329 697 - -
Lja3g0634 703 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 135 - -
Lja3g0634 703 Pfam Leucine rich repeat 437 497 IPR001611 GO:0005515
Lja3g0634 703 Pfam Leucine rich repeat 131 189 IPR001611 GO:0005515
Lja3g0634 703 Gene3D Ribonuclease Inhibitor 27 331 IPR032675 -
Lja3g0634 703 SUPERFAMILY L domain-like 345 696 - -
Lja3g0634 703 Pfam Leucine rich repeat N-terminal domain 30 69 IPR013210 -
Lja3g0634 703 Pfam Leucine rich repeat N-terminal domain 349 387 IPR013210 -
Lja3g0634 703 SUPERFAMILY L domain-like 27 314 - -
Lja3g0634 703 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 329 697 - -
Lja3g0634 703 PANTHER DNA DAMAGE-REPAIR/TOLERATION PROTEIN DRT100 9 135 - -
Lja3g0634 703 Gene3D Ribonuclease Inhibitor 418 703 IPR032675 -
Lja3g0634 703 Gene3D Ribonuclease Inhibitor 344 417 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g0634 Lja-Chr3 6351306 6356500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g0634 97 702 Receptor kinase-like Gene Family AT5G46330 30.866 1.50e-66 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g0634 - - lja:Lj3g3v3246320.1 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g0634 3 6351306 6356500 Lja3g0634 3 6351306 6356500 ECH
Lja3g0634 3 6351306 6356500 Lja3g2708 3 39307774 39309207 ECH
Lja3g2708 3 39307774 39309207 Lja3g0634 3 6351306 6356500 PCT